RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 HTRA2O43464 458 aaPredicted RBP10.44□□□□□ -0.74
NR1I3-222ENST00000506018 PROSCO94903 275 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 MYF5P13349 255 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 TCF4P15884 667 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 CR2P20023 1033 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 RBMS1P29558 406 aaKnown RBP10.44□□□□□ -0.74
NR1I3-222ENST00000506018 EIF2S3P41091 472 aaKnown RBP10.44□□□□□ -0.74
NR1I3-222ENST00000506018 EPHB1P54762 984 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 PCBP4P57723 403 aaKnown RBP10.44□□□□□ -0.74
NR1I3-222ENST00000506018 GABREP78334 506 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 IFI16Q16666 785 aaKnown RBP10.44□□□□□ -0.74
NR1I3-222ENST00000506018 ISXQ2M1V0 245 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 DENND2CQ68D51 928 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 PNCKQ6P2M8 343 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 SLC35F3Q8IY50 421 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 ZNF248Q8NDW4 579 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 PCDH19Q8TAB3 1148 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 FAM71BQ8TC56 605 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 RBM15Q96T37 977 aaKnown RBP eCLIP10.44□□□□□ -0.74
NR1I3-222ENST00000506018 CLPBQ9H078 707 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 SYNDIG1Q9H7V2 258 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 POLR1BQ9H9Y6 1135 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 NT5MQ9NPB1 228 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 THSD1Q9NS62 852 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 ETNK2Q9NVF9 386 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 RALYQ9UKM9 306 aaKnown RBP10.44□□□□□ -0.74
NR1I3-222ENST00000506018 PCDHGC4Q9Y5F7 938 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 U3KQA8 63 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 ZFC3H1O60293 1989 aaKnown RBP10.43□□□□□ -0.74
NR1I3-222ENST00000506018 GOLGA6CA6NDK9 693 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 GOLGA6BA6NDN3 693 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 HEXIM1O94992 359 aaKnown RBP10.43□□□□□ -0.74
NR1I3-222ENST00000506018 PGLSO95336 258 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 PEX11BO96011 259 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 PYGLP06737 847 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 GOLGA6DP0CG33 693 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 MYCLP1P12525 358 aaPredicted RBP10.43□□□□□ -0.74
NR1I3-222ENST00000506018 TGM2P21980 687 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 CCNCP24863 283 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 MAN1A1P33908 653 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 TRIM23P36406 574 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 GARSP41250 739 aaKnown RBP10.43□□□□□ -0.74
NR1I3-222ENST00000506018 LSSP48449 732 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 ERVPABLB-1P60509 514 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 MAXP61244 160 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 DPYSL3Q14195 570 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 PAFAH1B3Q15102 231 aaKnown RBP10.43□□□□□ -0.74
NR1I3-222ENST00000506018 SPA17Q15506 151 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 ANKRD20A8PQ5CZ79 823 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 BROXQ5VW32 411 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 TXNRD3NBQ6F5E7 133 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 TAF8Q7Z7C8 310 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 TP53INP2Q8IXH6 220 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 KIAA1524Q8TCG1 905 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.43□□□□□ -0.74
NR1I3-222ENST00000506018 FUBP1Q96AE4 644 aaKnown RBP10.43□□□□□ -0.74
NR1I3-222ENST00000506018 SCRN2Q96FV2 425 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 LGMNQ99538 433 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 SEMA3CQ99985 751 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 CCDC3Q9BQI4 270 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 MAK16Q9BXY0 300 aaKnown RBP10.43□□□□□ -0.74
NR1I3-222ENST00000506018 NOD2Q9HC29 1040 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 GOLGA6AQ9NYA3 693 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 SIRPGQ9P1W8 387 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 TTLL3Q9Y4R7 772 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 PCDHB1Q9Y5F3 818 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 ZFHX4Q86UP3 3567 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 ZFYVE26Q68DK2 2539 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 KIF26BQ2KJY2 2108 aa10.43□□□□□ -0.74
NR1I3-222ENST00000506018 TTC24A2A3L6 582 aaPredicted RBP10.42□□□□□ -0.74
NR1I3-222ENST00000506018 MATN3O15232 486 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 MFSD11O43934 449 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 DXOO77932 396 aaKnown RBP10.42□□□□□ -0.74
NR1I3-222ENST00000506018 MPOP05164 745 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 TMEM253P0C7T8 217 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 ZNF30P17039 623 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 FECHP22830 423 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 ARHGAP25P42331 645 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 MLLT3P42568 568 aaPredicted RBP10.42□□□□□ -0.74
NR1I3-222ENST00000506018 GALNT2Q10471 571 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 ILF3Q12906 894 aaKnown RBP eCLIP10.42□□□□□ -0.74
NR1I3-222ENST00000506018 TRAF2Q12933 501 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 MMRN1Q13201 1228 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 BIRC2Q13490 618 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 CNGA3Q16281 694 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 C3orf38Q5JPI3 329 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 PERM1Q5SV97 790 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 NCBP2-AS2Q69YL0 99 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 RAET1GQ6H3X3 334 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 CRTC1Q6UUV9 634 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 RHOT2Q8IXI1 618 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 PGBD5Q8N414 524 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 ARL14Q8N4G2 192 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 TEX26Q8N6G2 289 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 PLA2G15Q8NCC3 412 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 CCNYQ8ND76 341 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 FAM46DQ8NEK8 389 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 FATE1Q969F0 183 aa10.42□□□□□ -0.74
NR1I3-222ENST00000506018 CCDC97Q96F63 343 aaPredicted RBP10.42□□□□□ -0.74
NR1I3-222ENST00000506018 DTD2Q96FN9 168 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms