RNA–Protein interactions for RNA: ENST00000504335.1

SMTN-221, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-221ENST00000504335 ZMYND11Q15326 602 aa13.63□□□□□ -0.23
SMTN-221ENST00000504335 SAMD4BQ5PRF9 694 aaKnown RBP13.63□□□□□ -0.23
SMTN-221ENST00000504335 TIGD3Q6B0B8 471 aa13.63□□□□□ -0.23
SMTN-221ENST00000504335 TMEM81Q6P7N7 255 aa13.63□□□□□ -0.23
SMTN-221ENST00000504335 P2RY8Q86VZ1 359 aa13.63□□□□□ -0.23
SMTN-221ENST00000504335 SLFN12Q8IYM2 578 aa13.63□□□□□ -0.23
SMTN-221ENST00000504335 FAM71AQ8IYT1 594 aa13.63□□□□□ -0.23
SMTN-221ENST00000504335 GLB1L3Q8NCI6 653 aaPredicted RBP13.63□□□□□ -0.23
SMTN-221ENST00000504335 DNAJA4Q8WW22 397 aaPredicted RBP13.63□□□□□ -0.23
SMTN-221ENST00000504335 SLC9A6Q92581 669 aa13.63□□□□□ -0.23
SMTN-221ENST00000504335 AKAP1Q92667 903 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMTN-221ENST00000504335 TBC1D22BQ9NU19 505 aa13.63□□□□□ -0.23
SMTN-221ENST00000504335 RAB20Q9NX57 234 aa13.63□□□□□ -0.23
SMTN-221ENST00000504335 ZNF224Q9NZL3 707 aa13.63□□□□□ -0.23
SMTN-221ENST00000504335 MKLN1Q9UL63 735 aa13.63□□□□□ -0.23
SMTN-221ENST00000504335 KIAA1024Q9UPX6 916 aa13.63□□□□□ -0.23
SMTN-221ENST00000504335 F8W036 122 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 STX7O15400 261 aaKnown RBP13.62□□□□□ -0.23
SMTN-221ENST00000504335 PLIN3O60664 434 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 OR2B3O76000 313 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 SNAPINO95295 136 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 C1QAP02745 245 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 PROS1P07225 676 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 PRKCHP24723 683 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 CNTFP26441 200 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 GZMKP49863 264 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 RIPPLY1Q0D2K3 151 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 CSTF3Q12996 717 aaKnown RBP13.62□□□□□ -0.23
SMTN-221ENST00000504335 GRM4Q14833 912 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 PSMD5Q16401 504 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 STRADAQ7RTN6 431 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 THAP5Q7Z6K1 395 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 IGDCC3Q8IVU1 814 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 NUAK2Q9H093 628 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 MIR1-1HGQ9H1L0 117 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 ZNF385DQ9H6B1 395 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 ING3Q9NXR8 418 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 SFMBT1Q9UHJ3 866 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 PGAP2Q9UHJ9 254 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 HSPE1-MOB4S4R3N1 261 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 PNMA8CA0A1B0GUJ8 204 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 AQP12BA6NM10 295 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 GMDSO60547 372 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 TNNI3P19429 210 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 LTKP29376 864 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 FLI1Q01543 452 aaPredicted RBP13.62□□□□□ -0.23
SMTN-221ENST00000504335 CBLBQ13191 982 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 BMPR2Q13873 1038 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 EFR3AQ14156 821 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 ACOX1Q15067 660 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 AQP12AQ8IXF9 295 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 OR52H1Q8NGJ2 320 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 WDR48Q8TAF3 677 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 GJA10Q969M2 543 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 TMCO6Q96DC7 493 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 MUS81Q96NY9 551 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 ZNF300Q96RE9 604 aaPredicted RBP13.62□□□□□ -0.23
SMTN-221ENST00000504335 PIP5K1AQ99755 562 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 ZNF416Q9BWM5 594 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 SPAG4Q9NPE6 437 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 ITM2CQ9NQX7 267 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 PCDHB16Q9NRJ7 776 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 SDHAF3Q9NRP4 125 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 TBC1D13Q9NVG8 400 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 SARDHQ9UL12 918 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 USP54Q70EL1 1684 aa13.62□□□□□ -0.23
SMTN-221ENST00000504335 CYP3A7-CYP3A51PA0A087WV96 503 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 MEIOCA2RUB1 952 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 TCAF2A6NFQ2 919 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 OR6C70A6NIJ9 312 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 SLC37A4O43826 429 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 TMEM63AO94886 807 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 CD1EP15812 388 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 CYP3A7P24462 503 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 DNAJB1P25685 340 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 PUM3Q15397 648 aaKnown RBP13.61□□□□□ -0.23
SMTN-221ENST00000504335 CA9Q16790 459 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 N4BP2L1Q5TBK1 243 aaPredicted RBP13.61□□□□□ -0.23
SMTN-221ENST00000504335 TAF2Q6P1X5 1199 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 USP50Q70EL3 339 aaPredicted RBP13.61□□□□□ -0.23
SMTN-221ENST00000504335 EFL1Q7Z2Z2 1120 aaKnown RBP13.61□□□□□ -0.23
SMTN-221ENST00000504335 GPAT4Q86UL3 456 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 SYTL1Q8IYJ3 562 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 TMEM199Q8N511 208 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 SDR42E1Q8WUS8 393 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 RSAD2Q8WXG1 361 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 FYTTD1Q96QD9 318 aaKnown RBP13.61□□□□□ -0.23
SMTN-221ENST00000504335 APOL5Q9BWW9 433 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 DCDC2Q9UHG0 476 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 HRH3Q9Y5N1 445 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 CNTNAP2Q9UHC6 1331 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 AP3D1O14617 1153 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 SLC22A5O76082 557 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 INMTO95050 263 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 HSPA4LO95757 839 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 GARSP41250 739 aaKnown RBP13.61□□□□□ -0.23
SMTN-221ENST00000504335 TRAF3Q13114 568 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 STX5Q13190 355 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 C4orf46Q504U0 113 aa13.61□□□□□ -0.23
SMTN-221ENST00000504335 RANBP10Q6VN20 620 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms