RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 RHDQ02161 417 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 USP17L24Q0WX57 530 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 GALNT2Q10471 571 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TRIM32Q13049 653 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 KCNJ8Q15842 424 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PRMT9Q6P2P2 845 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ADGRD1Q6QNK2 874 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ZBTB49Q6ZSB9 765 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 BMP8AQ7Z5Y6 402 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PDZD3Q86UT5 571 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 RASAL3Q86YV0 1011 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PGAM4Q8N0Y7 254 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 DHRSXQ8N5I4 330 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CPSF7Q8N684 471 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SMG8Q8ND04 991 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TTC8Q8TAM2 541 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ENKURQ8TC29 256 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 LINC00615Q96LM1 132 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TMEM175Q9BSA9 504 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TINF2Q9BSI4 451 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 RTKNQ9BST9 563 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 JAM3Q9BX67 310 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TMEM120AQ9BXJ8 343 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 EBF3Q9H4W6 596 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 HPS4Q9NQG7 708 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 USP36Q9P275 1121 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CLDN16Q9Y5I7 305 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TDRD6O60522 2096 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 REV3LO60673 3130 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CEP295Q9C0D2 2601 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 MAGEB6P1A0A0J9YX57 407 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RNF103-CHMP3A0A140T963 221 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 GOLGA8IPA6NC78 632 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TRIM49BA6NDI0 452 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 MROH6A6NGR9 719 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 KPNA3O00505 521 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 APOL1O14791 398 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 DCLK1O15075 740 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 VILLO15195 856 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TEX28O15482 410 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 UGT1A9O60656 530 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 GLRA3O75311 464 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 GPC4O75487 556 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 GPIP06744 558 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CYP2C8P10632 490 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 UGT1A6P19224 532 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 UGT1A1P22309 533 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 UGT1A4P22310 534 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 UGT1A3P35503 534 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 UGT1A5P35504 534 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ASPAP45381 313 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PPP5CP53041 499 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RPS3AP61247 264 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CYP4F8P98187 520 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RUNX1T1Q06455 604 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ODF1Q14990 250 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 KNOP1Q1ED39 458 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 DPY19L1Q2PZI1 675 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PRR16Q569H4 304 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 MTX3Q5HYI7 312 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 METTL24Q5JXM2 366 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TMTC4Q5T4D3 741 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 KIAA0319Q5VV43 1072 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RSBN1Q5VWQ0 802 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RAP1GAP2Q684P5 730 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 IYDQ6PHW0 289 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PIK3AP1Q6ZUJ8 805 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF765Q7L2R6 523 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 EEPD1Q7L9B9 569 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 MCOLN3Q8TDD5 553 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TRIB2Q92519 343 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 STAMQ92783 540 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 C9orf72Q96LT7 481 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 NIPAL2Q9H841 368 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 UGT1A7Q9HAW7 530 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 UGT1A10Q9HAW8 530 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 UGT1A8Q9HAW9 530 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TMEM8AQ9HCN3 771 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 DDX28Q9NUL7 540 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ARL8BQ9NVJ2 186 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RABL2AQ9UBK7 228 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 VTI1BQ9UEU0 232 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF229Q9UJW7 825 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RIPK3Q9Y572 518 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CPQQ9Y646 472 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CLEC18AA5D8T8 446 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 FAM205CA6NFA0 338 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ANHXE9PGG2 379 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 POC1B-GALNT4F8VUJ3 575 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 H3BNH8 94 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 FXYD1O00168 92 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 POLR1CO15160 346 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CLOCKO15516 846 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 EOMESO95936 686 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 NR3C2P08235 984 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PLEKP08567 350 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 C1SP09871 688 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 FGFR4P22455 802 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 DCKP27707 260 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RPL9P32969 192 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms