RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ERP27Q96DN0 273 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 HES6Q96HZ4 224 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 APOLD1Q96LR9 279 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 MAP7D2Q96T17 732 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 NTPCRQ9BSD7 190 aaKnown RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 MSTO1Q9BUK6 570 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 STRA6Q9BX79 667 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 FTOQ9C0B1 505 aaKnown RBP eCLIP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 TKTL2Q9H0I9 626 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 CATSPERBQ9H7T0 1116 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 POLR1BQ9H9Y6 1135 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 MAGEE1Q9HCI5 957 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 KRCC1Q9NPI7 259 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 ASAH2Q9NR71 780 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 CYSLTR2Q9NS75 346 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 HAUS2Q9NVX0 235 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 HCFC1R1Q9NWW0 138 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 PLK2Q9NYY3 685 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 CLIC5Q9NZA1 410 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 WNT16Q9UBV4 365 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 SLCO3A1Q9UIG8 710 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 AAR2Q9Y312 384 aaKnown RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 ADAM18Q9Y3Q7 739 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 SRPRBQ9Y5M8 271 aaKnown RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 RAI2Q9Y5P3 530 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 LYVE1Q9Y5Y7 322 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 UTYO14607 1347 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 FAM237AA0A1B0GTK4 181 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 A0A1W2PQF6 199 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 RPS10-NUDT3A0A1W2PQS6 291 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 A0A1W2PRG0 241 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 A6NCN8 305 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 BECN2A8MW95 431 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 MYO1GB0I1T2 1018 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 PTGES3LE9PB15 166 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 MS4A18H0YCH9 400 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 FIBPO43427 364 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 ITM2AO43736 263 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 IPO7O95373 1038 aaKnown RBP2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 MLYCDO95822 493 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 CGAP01215 116 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 HOXB5P09067 269 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 VDRP11473 427 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 IL7RP16871 459 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 GNLYP22749 145 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 MYF6P23409 242 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 TNFRSF8P28908 595 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 RFX5P48382 616 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 PMS2P54278 862 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 F2RL1P55085 397 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 ZP1P60852 638 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 RPL36AP83881 106 aaKnown RBP2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 SORDQ00796 357 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 DDR1Q08345 913 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 TRAF1Q13077 416 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 PRKG2Q13237 762 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 OLIG2Q13516 323 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 MYBPC2Q14324 1141 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 DRAP1Q14919 205 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 MEA1Q16626 185 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 KRT71Q3SY84 523 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 DCAF6Q58WW2 860 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 FAM133BQ5BKY9 247 aaKnown RBP2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 SGO1Q5FBB7 561 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 OTUD1Q5VV17 481 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 SPATA1Q5VX52 437 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 HIST2H2BDQ6DRA6 164 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 KLHL35Q6PF15 583 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 FASTKD5Q7L8L6 764 aaKnown RBP2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 RBM23Q86U06 439 aaKnown RBP2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 HAPLN4Q86UW8 402 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 SPATA2LQ8IUW3 424 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 SFTPA2Q8IWL1 248 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 ARHGAP12Q8IWW6 846 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 SLC35F3Q8IY50 421 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 CCDC105Q8IYK2 499 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 TTC39CQ8N584 583 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 WDTC1Q8N5D0 677 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 ZBTB2Q8N680 514 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 HUS1BQ8NHY5 278 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 TMEM163Q8TC26 289 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 SCFD2Q8WU76 684 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 ERGIC1Q969X5 290 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 MMABQ96EY8 250 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 URB1-AS1Q96HZ7 61 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 CMTM3Q96MX0 182 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 ZNF570Q96NI8 536 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 GHITMQ9H3K2 345 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 KAT14Q9H8E8 782 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 DDX4Q9NQI0 724 aaKnown RBP2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 RRP7BPQ9NSQ0 103 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 TMEM51Q9NW97 253 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 CISD1Q9NZ45 108 aaKnown RBP2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 DLGAP2Q9P1A6 1054 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 CNOT8Q9UFF9 292 aaKnown RBP2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 NOL7Q9UMY1 257 aaKnown RBP2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 GPR34Q9UPC5 381 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 NFE2L3Q9Y4A8 694 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 MMP24Q9Y5R2 645 aa2.5□□□□□ -2.01
HMGB1P35-201ENST00000503360 K7ENM7 598 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms