RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 RRP8O43159 456 aaKnown RBP16.26■□□□□ 0.19
SCLT1-204ENST00000503215 HOXC4P09017 264 aaPredicted RBP16.26■□□□□ 0.19
SCLT1-204ENST00000503215 SERPINB6P35237 376 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 GARSP41250 739 aaKnown RBP16.26■□□□□ 0.19
SCLT1-204ENST00000503215 DSC2Q02487 901 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 GBE1Q04446 702 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 TLE3Q04726 772 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 PAFAH1B3Q15102 231 aaKnown RBP16.26■□□□□ 0.19
SCLT1-204ENST00000503215 HADHQ16836 314 aaKnown RBP16.26■□□□□ 0.19
SCLT1-204ENST00000503215 LRRC69Q6ZNQ3 347 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 TAF8Q7Z7C8 310 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 GKN2Q86XP6 184 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 SDR16C5Q8N3Y7 309 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 KCTD6Q8NC69 237 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 FAM46DQ8NEK8 389 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 TPCN2Q8NHX9 752 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 SCG3Q8WXD2 468 aaKnown RBP16.26■□□□□ 0.19
SCLT1-204ENST00000503215 RAPGEF5Q92565 580 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 IQCDQ96DY2 449 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 NUS1Q96E22 293 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 CHP1Q99653 195 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 WDR26Q9H7D7 661 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 RCOR3Q9P2K3 495 aaPredicted RBP16.26■□□□□ 0.19
SCLT1-204ENST00000503215 MOSPD1Q9UJG1 213 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.26■□□□□ 0.192e-6■■■■□ 20
SCLT1-204ENST00000503215 A0A1W2PQM1 296 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 NOBOXO60393 691 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 DXOO77932 396 aaKnown RBP16.26■□□□□ 0.19
SCLT1-204ENST00000503215 POLD2P49005 469 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 ITKQ08881 620 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 NIPAL4Q0D2K0 466 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 SLC18A3Q16572 532 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 ARMC12Q5T9G4 340 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 FOXR1Q6PIV2 292 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 HEATR4Q86WZ0 1026 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 BBS5Q8N3I7 341 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 Q8N9G6 341 aaPredicted RBP16.26■□□□□ 0.19
SCLT1-204ENST00000503215 GPR156Q8NFN8 814 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 ATL2Q8NHH9 583 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 NSMCE1Q8WV22 266 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 MAML1Q92585 1016 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 DTD2Q96FN9 168 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 SCRN2Q96FV2 425 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 ZNF578Q96N58 590 aaPredicted RBP16.26■□□□□ 0.19
SCLT1-204ENST00000503215 MCCC1Q96RQ3 725 aaPredicted RBP16.26■□□□□ 0.19
SCLT1-204ENST00000503215 DNAJC7Q99615 494 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 FOXP3Q9BZS1 431 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 CD84Q9UIB8 345 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 ST14Q9Y5Y6 855 aa16.26■□□□□ 0.19
SCLT1-204ENST00000503215 SMG1Q96Q15 3661 aaKnown RBP16.25■□□□□ 0.19
SCLT1-204ENST00000503215 MGAQ8IWI9 3026 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 PRSS38A1L453 326 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 TNFRSF10CO14798 259 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 FZD6O60353 706 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 CEACAM5P06731 702 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 H2AFZP0C0S5 128 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 OGFOD3Q6PK18 319 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 H2AFVQ71UI9 128 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 TECPR1Q7Z6L1 1165 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 OR8K1Q8NGG5 319 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 ARRDC2Q8TBH0 407 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 FAF2Q96CS3 445 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 SLC46A1Q96NT5 459 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 TEX101Q9BY14 249 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 SPATS2LQ9NUQ6 558 aaKnown RBP16.25■□□□□ 0.19
SCLT1-204ENST00000503215 RBM22Q9NW64 420 aaKnown RBP eCLIP16.25■□□□□ 0.197e-6■■■■□ 24.6
SCLT1-204ENST00000503215 UVRAGQ9P2Y5 699 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 CHKBQ9Y259 395 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 PPIL1Q9Y3C6 166 aa16.25■□□□□ 0.19
SCLT1-204ENST00000503215 ARHGEF17Q96PE2 2063 aaPredicted RBP16.24■□□□□ 0.19
SCLT1-204ENST00000503215 UNC13CQ8NB66 2214 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 A0A1W2PQ67 120 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 GOLGA6CA6NDK9 693 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 GOLGA6BA6NDN3 693 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 B4DGG1 531 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 AGRPO00253 132 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 MATN3O15232 486 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 TCEA3O75764 348 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 SOD1P00441 154 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 PRLP01236 227 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 RPLP0P05388 317 aaKnown RBP16.24■□□□□ 0.19
SCLT1-204ENST00000503215 GOLGA6DP0CG33 693 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 CYP2A6P11509 494 aaPredicted RBP16.24■□□□□ 0.19
SCLT1-204ENST00000503215 MYCLP1P12525 358 aaPredicted RBP16.24■□□□□ 0.19
SCLT1-204ENST00000503215 CDK3Q00526 305 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 SPIDRQ14159 915 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 MESDQ14696 234 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 RALGPS1Q5JS13 557 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 LRRC66Q68CR7 880 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 SPECC1LQ69YQ0 1117 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 NRROSQ86YC3 692 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 LRRC49Q8IUZ0 686 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 CTNNBL1Q8WYA6 563 aaPredicted RBP16.24■□□□□ 0.19
SCLT1-204ENST00000503215 TSGA13Q96PP4 275 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 AGAP2Q99490 1192 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 LGMNQ99538 433 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 ZNF670Q9BS34 389 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 FRMD8Q9BZ67 464 aaPredicted RBP16.24■□□□□ 0.19
SCLT1-204ENST00000503215 ABCG8Q9H221 673 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 CARS2Q9HA77 564 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms