RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 PNPLA4P41247 253 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 BLKP51451 505 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 NDST1P52848 882 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 MAP3K7CLP57077 242 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 RPS15P62841 145 aaKnown RBP4.69□□□□□ -1.66
CSTF1-207ENST00000498689 COG7P83436 770 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 SGCGQ13326 291 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 CAPRIN1Q14444 709 aaKnown RBP4.69□□□□□ -1.66
CSTF1-207ENST00000498689 ZNF174Q15697 407 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 ELOA3BQ3SY89 546 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 FBLN7Q53RD9 439 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 EARS2Q5JPH6 523 aaKnown RBP4.69□□□□□ -1.66
CSTF1-207ENST00000498689 B3GNTL1Q67FW5 361 aaPredicted RBP4.69□□□□□ -1.66
CSTF1-207ENST00000498689 KIAA1161Q6NSJ0 714 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 ERN2Q76MJ5 926 aaKnown RBP4.69□□□□□ -1.66
CSTF1-207ENST00000498689 SYT9Q86SS6 491 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 WDR49Q8IV35 697 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 TMEM151BQ8IW70 566 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 CARNMT1Q8N4J0 409 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 MARVELD2Q8N4S9 558 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 CSGALNACT2Q8N6G5 542 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.69□□□□□ -1.66
CSTF1-207ENST00000498689 ENDOVQ8N8Q3 282 aaKnown RBP4.69□□□□□ -1.66
CSTF1-207ENST00000498689 CHST14Q8NCH0 376 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 ELOA3Q8NG57 546 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 ZDHHC1Q8WTX9 485 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 OR1E3Q8WZA6 343 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 LARP4BQ92615 738 aaKnown RBP4.69□□□□□ -1.66
CSTF1-207ENST00000498689 BICD1Q96G01 975 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 C1orf159Q96HA4 380 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 TCEANC2Q96MN5 208 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 PRICKLE1Q96MT3 831 aaPredicted RBP4.69□□□□□ -1.66
CSTF1-207ENST00000498689 DMRTA2Q96SC8 542 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 ASB7Q9H672 318 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 L2HGDHQ9H9P8 463 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 GDPD2Q9HCC8 539 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 DIAPH3Q9NSV4 1193 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 SCHIP1Q9P0W5 487 aaPredicted RBP4.69□□□□□ -1.66
CSTF1-207ENST00000498689 PCDHA4Q9UN74 947 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 SCML2Q9UQR0 700 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 ZNF835Q9Y2P0 537 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 FADS3Q9Y5Q0 445 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 ST14Q9Y5Y6 855 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 USP3Q9Y6I4 520 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 A6NNC1 897 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 HHLA1C9JL84 531 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 ANKRD63C9JTQ0 380 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 M0R082 166 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 O00370 1275 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 ZBTB43O43298 467 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 KLK8O60259 260 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 PRAMEF2O60811 474 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 FAM157BP0CG42 384 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 CD58P19256 250 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 TXKP42681 527 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 GPR3P46089 330 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 PPM1FP49593 454 aaPredicted RBP4.68□□□□□ -1.66
CSTF1-207ENST00000498689 CXCR3P49682 368 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 SEPHS1P49903 392 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 EPHB1P54762 984 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 RRADP55042 308 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 NR1H2P55055 460 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 CASP6P55212 293 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 YPEL5P62699 121 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 RPS24P62847 133 aaKnown RBP4.68□□□□□ -1.66
CSTF1-207ENST00000498689 TFAMQ00059 246 aaKnown RBP4.68□□□□□ -1.66
CSTF1-207ENST00000498689 INPP5AQ14642 412 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 TRIP4Q15650 581 aaPredicted RBP4.68□□□□□ -1.66
CSTF1-207ENST00000498689 ACCSLQ4AC99 568 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 FAM133BQ5BKY9 247 aaKnown RBP4.68□□□□□ -1.66
CSTF1-207ENST00000498689 ARTNQ5T4W7 220 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 PIK3R6Q5UE93 754 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 RNF219Q5W0B1 726 aaPredicted RBP4.68□□□□□ -1.66
CSTF1-207ENST00000498689 PWWP2BQ6NUJ5 590 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 CAPN12Q6ZSI9 719 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 CEP128Q6ZU80 1094 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 C8orf86Q6ZUL3 223 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 TICAM2Q86XR7 235 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 NRROSQ86YC3 692 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 IRF2BP1Q8IU81 584 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 BLIDQ8IZY5 108 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 CFAP52Q8N1V2 620 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 TAB3Q8N5C8 712 aaPredicted RBP4.68□□□□□ -1.66
CSTF1-207ENST00000498689 TP53I13Q8NBR0 393 aaPredicted RBP4.68□□□□□ -1.66
CSTF1-207ENST00000498689 B3GALNT2Q8NCR0 500 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 KIAA0895Q8NCT3 520 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 OR1N1Q8NGS0 311 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 ZNF417Q8TAU3 575 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 GRIN3AQ8TCU5 1115 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 AGAP11Q8TF27 550 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 TM9SF4Q92544 642 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 ZMYND19Q96E35 227 aaPredicted RBP4.68□□□□□ -1.66
CSTF1-207ENST00000498689 ZNF587Q96SQ5 575 aaPredicted RBP4.68□□□□□ -1.66
CSTF1-207ENST00000498689 MED10Q9BTT4 135 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 TKTL2Q9H0I9 626 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 XYLT2Q9H1B5 865 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 NCOA5Q9HCD5 579 aaKnown RBP4.68□□□□□ -1.66
CSTF1-207ENST00000498689 DMAP1Q9NPF5 467 aaPredicted RBP4.68□□□□□ -1.66
CSTF1-207ENST00000498689 ANLNQ9NQW6 1124 aa4.68□□□□□ -1.66
CSTF1-207ENST00000498689 KRT82Q9NSB4 513 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms