RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 RBP3P10745 1247 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 CYP2A6P11509 494 aaPredicted RBP11.27□□□□□ -0.61
ERCC8-208ENST00000497892 CD59P13987 128 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 GM2AP17900 193 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 CSRP1P21291 193 aaKnown RBP11.27□□□□□ -0.61
ERCC8-208ENST00000497892 RBL1P28749 1068 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 CD68P34810 354 aaPredicted RBP11.27□□□□□ -0.61
ERCC8-208ENST00000497892 RABIFP47224 123 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 ATP5OP48047 213 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 CCT8P50990 548 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 EIF3EP60228 445 aaKnown RBP11.27□□□□□ -0.61
ERCC8-208ENST00000497892 PFN3P60673 137 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 LRRC14Q15048 493 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 IRF4Q15306 451 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 RPS6KA1Q15418 735 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 FAM182AQ5T1J6 154 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 Q6ZSR6 202 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 PTAR1Q7Z6K3 402 aaPredicted RBP11.27□□□□□ -0.61
ERCC8-208ENST00000497892 PIP4P1Q86T03 277 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 NDUFAF2Q8N183 169 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 ZNF567Q8N184 647 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 OXR1Q8N573 874 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 TRIB3Q96RU7 358 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 RBM15Q96T37 977 aaKnown RBP eCLIP11.27□□□□□ -0.618e-6■■■■■ 30.1
ERCC8-208ENST00000497892 FAM118BQ9BPY3 351 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 PCDH9Q9HC56 1237 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 MBNL1Q9NR56 388 aaKnown RBP11.27□□□□□ -0.61
ERCC8-208ENST00000497892 KLHL8Q9P2G9 620 aaPredicted RBP11.27□□□□□ -0.61
ERCC8-208ENST00000497892 GMPR2Q9P2T1 348 aaKnown RBP11.27□□□□□ -0.61
ERCC8-208ENST00000497892 CHKBQ9Y259 395 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 LRP4O75096 1905 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 TCRBV7S2A1N4TA0A589 114 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 DCDC2BA2VCK2 349 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 A8MX80 341 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 KCNK3O14649 394 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 YKT6O15498 198 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 ZSCAN12O43309 604 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 LZTS3O60299 673 aaPredicted RBP11.26□□□□□ -0.61
ERCC8-208ENST00000497892 PCDHGA12O60330 932 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 RECQL5O94762 991 aaPredicted RBP11.26□□□□□ -0.61
ERCC8-208ENST00000497892 CTPS1P17812 591 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 NFKB1P19838 968 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 EPHA8P29322 1005 aaPredicted RBP11.26□□□□□ -0.61
ERCC8-208ENST00000497892 HNF1BP35680 557 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 RXRGP48443 463 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 ARRB1P49407 418 aaPredicted RBP11.26□□□□□ -0.61
ERCC8-208ENST00000497892 EPHB1P54762 984 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 PTPRRQ15256 657 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 SHBQ15464 509 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 WSCD2Q2TBF2 565 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 SEL1L2Q5TEA6 688 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 KDM7AQ6ZMT4 941 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 TSPAN33Q86UF1 283 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 DCP2Q8IU60 420 aaKnown RBP11.26□□□□□ -0.61
ERCC8-208ENST00000497892 NAXDQ8IW45 347 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 CBARPQ8N350 705 aaPredicted RBP11.26□□□□□ -0.61
ERCC8-208ENST00000497892 LPCAT1Q8NF37 534 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 SPATA22Q8NHS9 363 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 SLC35B2Q8TB61 432 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 COQ10AQ96MF6 247 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 SMIM14Q96QK8 99 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 LYSMD1Q96S90 227 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 FERMT1Q9BQL6 677 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 TLR10Q9BXR5 811 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 ADGRE3Q9BY15 652 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 C10orf88Q9H8K7 445 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 TRHDEQ9UKU6 1024 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 DNPEPQ9ULA0 475 aa11.26□□□□□ -0.61
ERCC8-208ENST00000497892 COL5A1P20908 1838 aaPredicted RBP11.25□□□□□ -0.61
ERCC8-208ENST00000497892 SCN8AQ9UQD0 1980 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 NCOR2Q9Y618 2525 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 SPTY2D1-AS1A0A0U1RR47 76 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 ANKRD66B4E2M5 251 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 TOR1BO14657 336 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 KCNN4O15554 427 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 FLRT2O43155 660 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 STK10O94804 968 aaKnown RBP11.25□□□□□ -0.61
ERCC8-208ENST00000497892 MT-CYBP00156 380 aaPredicted RBP11.25□□□□□ -0.61
ERCC8-208ENST00000497892 ZNF30P17039 623 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 YPEL5P62699 121 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 IL9RQ01113 521 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 MTM1Q13496 603 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 PDE1CQ14123 709 aaPredicted RBP11.25□□□□□ -0.61
ERCC8-208ENST00000497892 ARHGEF7Q14155 803 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 FZD2Q14332 565 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 GALNT3Q14435 633 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 ACOX1Q15067 660 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 PCSK7Q16549 785 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 QPCTQ16769 361 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 PRAMEF14Q5SWL7 426 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 TPRG1LQ5T0D9 272 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 LRRC66Q68CR7 880 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 ITPRIPL1Q6GPH6 555 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 ESRP1Q6NXG1 681 aaKnown RBP11.25□□□□□ -0.61
ERCC8-208ENST00000497892 DARS2Q6PI48 645 aaKnown RBP11.25□□□□□ -0.61
ERCC8-208ENST00000497892 KDELC1Q6UW63 502 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 DBX2Q6ZNG2 339 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 PID1Q7Z2X4 250 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 DGLUCYQ7Z3D6 616 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 HSD11B1LQ7Z5J1 315 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms