RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	PCDHB3	Q9Y5E6	796 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	UBIAD1	Q9Y5Z9	338 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	LAMB1	P07942	1786 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MAFG	O15525	162 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	HSMCR30	P0CW71	290 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	GFAP	P14136	432 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TAS2R39	P59534	338 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	UBE3A	Q05086	875 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	LIPE	Q05469	1076 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SLC36A3	Q495N2	470 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	WDR45B	Q5MNZ6	344 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	HHIPL2	Q6UWX4	724 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	FAM160B2	Q86V87	743 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RETREG3	Q86VR2	466 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ANKFN1	Q8N957	763 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	HEXDC	Q8WVB3	486 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PROX1	Q92786	737 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	HPDL	Q96IR7	371 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NODAL	Q96S42	347 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	KCTD15	Q96SI1	283 aa	Predicted RBP	10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NAT9	Q9BTE0	207 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MID1IP1	Q9NPA3	183 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RASSF1	Q9NS23	344 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	DDX60L	Q5H9U9	1706 aa	Known RBP	10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	OGT	O15294	1046 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RECQL5	O94762	991 aa	Predicted RBP	10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	IL18RAP	O95256	599 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	THRB	P10828	461 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CYP3A5	P20815	502 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ASPA	P45381	313 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RPS3A	P61247	264 aa	Known RBP	10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TNFAIP2	Q03169	654 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SEMA5A	Q13591	1074 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TRIP4	Q15650	581 aa	Predicted RBP	10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SDE2	Q6IQ49	451 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ZDHHC13	Q8IUH4	622 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SPPL2B	Q8TCT7	592 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TMEM246	Q9BRR3	403 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SIK2	Q9H0K1	926 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RIBC2	Q9H4K1	309 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MAGEE1	Q9HCI5	957 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	HPS4	Q9NQG7	708 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CCM2L	Q9NUG4	571 aa	Predicted RBP	10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ANKMY1	Q9P2S6	941 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	IFT52	Q9Y366	437 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TCRBV3S1	A0A5B6	114 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CENPX	A8MT69	81 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	HCRT	O43612	131 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	H2AFY	O75367	372 aa	Known RBP	10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	JRK	O75564	520 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	GCAT	O75600	419 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PGLS	O95336	258 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	APOA4	P06727	396 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	HGF	P14210	728 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ENDOU	P21128	410 aa	Known RBP	10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ZNF132	P52740	706 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RABGGTB	P53611	331 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TMBIM6	P55061	237 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	YBX1	P67809	324 aa	Known RBP	10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CYP4F2	P78329	520 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NRG1	Q02297	640 aa	Predicted RBP	10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CHRNB3	Q05901	458 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CYP4F3	Q08477	520 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NSUN2	Q08J23	767 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ZFP69	Q49AA0	526 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	B3GNT9	Q6UX72	402 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	LSMEM2	Q8N112	164 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TRPV3	Q8NET8	790 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	OR52K2	Q8NGK3	314 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	OR13F1	Q8NGS4	319 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CNIH3	Q8TBE1	160 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RPRD1B	Q9NQG5	326 aa	Known RBP	10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MTMR10	Q9NXD2	777 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TMEM9	Q9P0T7	183 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	LIMD1	Q9UGP4	676 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SATB2	Q9UPW6	733 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	INVS	Q9Y283	1065 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TMX2	Q9Y320	296 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ORC6	Q9Y5N6	252 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	IRS2	Q9Y4H2	1338 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MGEA5	O60502	916 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	BMP2	P12643	396 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NFKB1	P19838	968 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	KCNA5	P22460	613 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	S100A5	P33763	92 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	GPD2	P43304	727 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	GSK3B	P49841	420 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	KCNK10	P57789	538 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CAPS	Q13938	189 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PLA2G4E	Q3MJ16	856 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CCDC58	Q4VC31	144 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CYBRD1	Q53TN4	286 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TJAP1	Q5JTD0	557 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	DESI1	Q6ICB0	168 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PEX5L	Q8IYB4	626 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	DTX3	Q8N9I9	347 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	UBASH3B	Q8TF42	649 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	KCNA7	Q96RP8	456 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TEX13B	Q9BXU2	312 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	EML4	Q9HC35	981 aa	Known RBP	10.63	□□□□□ -0.71

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