RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 C8orf74Q6P047 294 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 DPPA4Q7L190 304 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 LPCAT2Q7L5N7 544 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 DEFB119Q8N690 84 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 DNAAF3Q8N9W5 541 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 CADM4Q8NFZ8 388 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 MCCC1Q96RQ3 725 aaPredicted RBP20.08■□□□□ 0.81
CTSD-206ENST00000497544 WRAP53Q9BUR4 548 aaKnown RBP20.08■□□□□ 0.81
CTSD-206ENST00000497544 TRIM31Q9BZY9 425 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 PCED1AQ9H1Q7 454 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 C6orf106Q9H6K1 298 aaPredicted RBP20.08■□□□□ 0.81
CTSD-206ENST00000497544 L2HGDHQ9H9P8 463 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 ARNT2Q9HBZ2 717 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 MAGEE1Q9HCI5 957 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 GGT7Q9UJ14 662 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 TPX2Q9ULW0 747 aaKnown RBP20.08■□□□□ 0.81
CTSD-206ENST00000497544 UTP11Q9Y3A2 253 aaKnown RBP20.08■□□□□ 0.81
CTSD-206ENST00000497544 GON4LQ3T8J9 2241 aa20.08■□□□□ 0.8
CTSD-206ENST00000497544 SDK1Q7Z5N4 2213 aa20.08■□□□□ 0.8
CTSD-206ENST00000497544 SPAG17Q6Q759 2223 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 TMEM8BA6NDV4 472 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 CAPN8A6NHC0 703 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 DNALI1O14645 258 aaPredicted RBP20.07■□□□□ 0.8
CTSD-206ENST00000497544 SPINT1O43278 529 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 MMP20O60882 483 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 RHOBTB1O94844 696 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 SUN1O94901 812 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 FSBPO95073 299 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 KCNK5O95279 499 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 TPSB2P20231 275 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 MMP12P39900 470 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 RPS21P63220 83 aaKnown RBP20.07■□□□□ 0.8
CTSD-206ENST00000497544 PTPRRQ15256 657 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 TPSAB1Q15661 275 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 KIAA1161Q6NSJ0 714 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 HORMAD1Q86X24 394 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 PPIL6Q8IXY8 311 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 TMEFF1Q8IYR6 380 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 CPT1BQ92523 772 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 FOXJ1Q92949 421 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 SMIM14Q96QK8 99 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 ERP44Q9BS26 406 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 LRRC1Q9BTT6 524 aa20.07■□□□□ 0.8
CTSD-206ENST00000497544 A0A1W2PQU0 124 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 NPIPB15A6NHN6 443 aaPredicted RBP20.06■□□□□ 0.8
CTSD-206ENST00000497544 METTL12A8MUP2 240 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 LZTS3O60299 673 aaPredicted RBP20.06■□□□□ 0.8
CTSD-206ENST00000497544 FOXD2O60548 495 aaPredicted RBP20.06■□□□□ 0.8
CTSD-206ENST00000497544 TM7SF2O76062 418 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 PIRTP0C851 137 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 CCR5P51681 352 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 CDH17Q12864 832 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 SGCGQ13326 291 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 KCNJ11Q14654 390 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 ELF2Q15723 593 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 AASDHQ4L235 1098 aaPredicted RBP20.06■□□□□ 0.8
CTSD-206ENST00000497544 IZUMO3Q5VZ72 239 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 DENND2CQ68D51 928 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 CRTC1Q6UUV9 634 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 LIPIQ6XZB0 460 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 OR52K1Q8NGK4 314 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 BLOC1S5Q8TDH9 187 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 LYSMD1Q96S90 227 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 RAB17Q9H0T7 212 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 DUSP15Q9H1R2 295 aaPredicted RBP20.06■□□□□ 0.8
CTSD-206ENST00000497544 HACD3Q9P035 362 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 SHOC2Q9UQ13 582 aa20.06■□□□□ 0.8
CTSD-206ENST00000497544 HELZ2Q9BYK8 2649 aaKnown RBP20.06■□□□□ 0.8
CTSD-206ENST00000497544 C1orf232A0A0U1RR37 186 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 TCRBV7S3A2A0A539 114 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 IGLON5A6NGN9 336 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 AP3B1O00203 1094 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 NDC80O14777 642 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 HEXIM1O94992 359 aaKnown RBP20.05■□□□□ 0.8
CTSD-206ENST00000497544 ELFN1P0C7U0 828 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 ZNF30P17039 623 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 TPH1P17752 444 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 SPINK2P20155 84 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 MAT2AP31153 395 aaKnown RBP20.05■□□□□ 0.8
CTSD-206ENST00000497544 GRIA1P42261 906 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 MAGEA6P43360 314 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 LIG3P49916 1009 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 RALGDSQ12967 914 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 DENND5AQ6IQ26 1287 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 TSPAN33Q86UF1 283 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 TRIM69Q86WT6 500 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 NOA1Q8NC60 698 aaKnown RBP20.05■□□□□ 0.8
CTSD-206ENST00000497544 BBOF1Q8ND07 529 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 KLK6Q92876 244 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 SNF8Q96H20 258 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 GPR63Q9BZJ6 419 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 TRABDQ9H4I3 376 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 ZFYVE1Q9HBF4 777 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 RXFP3Q9NSD7 469 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 ZFR2Q9UPR6 939 aaKnown RBP20.05■□□□□ 0.8
CTSD-206ENST00000497544 WASF3Q9UPY6 502 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 SNX24Q9Y343 169 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 ADAMTS20P59510 1910 aa20.05■□□□□ 0.8
CTSD-206ENST00000497544 MEI4A8MW99 385 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms