RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 USP1O94782 785 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 IGLV3-19P01714 112 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 LPOP22079 712 aaPredicted RBP18.28■□□□□ 0.52
RGP1-202ENST00000496906 NMBRP28336 390 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 ADPRHP54922 357 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 PDE1BQ01064 536 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 PTSQ03393 145 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 STEAP4Q687X5 459 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 CES3Q6UWW8 571 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 LIPIQ6XZB0 460 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 UNC5AQ6ZN44 842 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 STYXQ8WUJ0 223 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 PEX13Q92968 403 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 PBXIP1Q96AQ6 731 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 MFSD3Q96ES6 412 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 SEMA4AQ9H3S1 761 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 SPATA6Q9NWH7 488 aaPredicted RBP18.28■□□□□ 0.52
RGP1-202ENST00000496906 IL17CQ9P0M4 197 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 SLC2A6Q9UGQ3 507 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 RPS6KL1Q9Y6S9 549 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 PSMD11O00231 422 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 NEMP1O14524 444 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 TSPAN6O43657 245 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 ERLIN1O75477 346 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 TTC4O95801 387 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 C1SP09871 688 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 PSMA3P25788 255 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 STC1P52823 247 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 PMS2P54278 862 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 PTPRCAPQ14761 206 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 CRYMQ14894 314 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 ANKRD20A4Q4UJ75 823 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 ESRP1Q6NXG1 681 aaKnown RBP18.27■□□□□ 0.52
RGP1-202ENST00000496906 BMP8AQ7Z5Y6 402 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 CBARPQ8N350 705 aaPredicted RBP18.27■□□□□ 0.52
RGP1-202ENST00000496906 TMEM105Q8N8V8 129 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 OR13C4Q8NGS5 318 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 OR13J1Q8NGT2 312 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 OR14C36Q8NHC7 312 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 ZNF669Q96BR6 464 aaPredicted RBP18.27■□□□□ 0.52
RGP1-202ENST00000496906 CFAP36Q96G28 342 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 DNAJC1Q96KC8 554 aaKnown RBP18.27■□□□□ 0.52
RGP1-202ENST00000496906 FCRL3Q96P31 734 aaPredicted RBP18.27■□□□□ 0.52
RGP1-202ENST00000496906 TPSD1Q9BZJ3 242 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 LRRC4CQ9HCJ2 640 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.27■□□□□ 0.52
RGP1-202ENST00000496906 ZDBF2Q9HCK1 2354 aa18.27■□□□□ 0.52
RGP1-202ENST00000496906 ZCWPW2A0A1B0GU75 182 aa18.26■□□□□ 0.51
RGP1-202ENST00000496906 STX7O15400 261 aaKnown RBP18.26■□□□□ 0.51
RGP1-202ENST00000496906 POLBP06746 335 aa18.26■□□□□ 0.51
RGP1-202ENST00000496906 ELFN1P0C7U0 828 aa18.26■□□□□ 0.51
RGP1-202ENST00000496906 H2AFXP16104 143 aaPredicted RBP18.26■□□□□ 0.51
RGP1-202ENST00000496906 LIG3P49916 1009 aa18.26■□□□□ 0.51
RGP1-202ENST00000496906 GPX6P59796 221 aa18.26■□□□□ 0.51
RGP1-202ENST00000496906 ACVR1Q04771 509 aa18.26■□□□□ 0.51
RGP1-202ENST00000496906 KYNUQ16719 465 aa18.26■□□□□ 0.51
RGP1-202ENST00000496906 UBAP2Q5T6F2 1119 aaKnown RBP18.26■□□□□ 0.51
RGP1-202ENST00000496906 TRMT10CQ7L0Y3 403 aaKnown RBP18.26■□□□□ 0.51
RGP1-202ENST00000496906 FAM124AQ86V42 546 aa18.26■□□□□ 0.51
RGP1-202ENST00000496906 PALM2Q8IXS6 379 aa18.26■□□□□ 0.51
RGP1-202ENST00000496906 OR4K2Q8NGD2 314 aa18.26■□□□□ 0.51
RGP1-202ENST00000496906 HNRNPLLQ8WVV9 542 aaKnown RBP18.26■□□□□ 0.51
RGP1-202ENST00000496906 TTC25Q96NG3 672 aa18.26■□□□□ 0.51
RGP1-202ENST00000496906 C19orf43Q9BQ61 176 aa18.26■□□□□ 0.51
RGP1-202ENST00000496906 WRAP53Q9BUR4 548 aaKnown RBP18.26■□□□□ 0.51
RGP1-202ENST00000496906 PRMT8Q9NR22 394 aaPredicted RBP18.26■□□□□ 0.51
RGP1-202ENST00000496906 NLE1Q9NVX2 485 aaPredicted RBP18.26■□□□□ 0.51
RGP1-202ENST00000496906 ZNF217O75362 1048 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 GM2AP17900 193 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 SSTR1P30872 391 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 PXNP49023 591 aaPredicted RBP18.25■□□□□ 0.51
RGP1-202ENST00000496906 SKIDA1Q1XH10 827 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 TMEM31Q5JXX7 168 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 SPANXN3Q5MJ09 141 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 CAPN12Q6ZSI9 719 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 HSD11B1LQ7Z5J1 315 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 FBXL6Q8N531 539 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 CXorf40AQ8TE69 158 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 BTBD1Q9H0C5 482 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 EPB41L4BQ9H329 900 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 KDM4CQ9H3R0 1056 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 SGK2Q9HBY8 427 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 PREBQ9HCU5 417 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 BPIFA1Q9NP55 256 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 CYP8B1Q9UNU6 501 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 PKP3Q9Y446 797 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 FAM169AQ9Y6X4 670 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 CUL9Q8IWT3 2517 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 MMP20O60882 483 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 PCDH8O95206 1070 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 C6P13671 934 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 TSHRP16473 764 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 HOXA6P31267 233 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 ACSL1P33121 698 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 SPINT3P49223 89 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 ARSDP51689 593 aa18.25■□□□□ 0.51
RGP1-202ENST00000496906 BEND6Q5SZJ8 279 aaPredicted RBP18.25■□□□□ 0.51
RGP1-202ENST00000496906 KIAA0930Q6ICG6 404 aaPredicted RBP18.25■□□□□ 0.51
RGP1-202ENST00000496906 RAVER1Q8IY67 606 aaKnown RBP18.25■□□□□ 0.51
RGP1-202ENST00000496906 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms