RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 OR3A3P47888 321 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 FLT3LGP49771 235 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 MAPK10P53779 464 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 FCGRTP55899 365 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 DEFA1P59665 94 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 DEFA3P59666 94 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 CCNA1P78396 465 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 CUL2Q13617 745 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 COL13A1Q5TAT6 717 aaPredicted RBP9.09□□□□□ -0.95
HPS4-217ENST00000496385 LIPMQ5VYY2 423 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 CYP2R1Q6VVX0 501 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 NAPRTQ6XQN6 538 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 FBXO11Q86XK2 927 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 RIOX2Q8IUF8 465 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 GALNT12Q8IXK2 581 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 OFCC1Q8IZS5 231 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 IL17RDQ8NFM7 739 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 URGCPQ8TCY9 931 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 C8orf48Q96LL4 319 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 CPNE1Q99829 537 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 HOPXQ9BPY8 73 aaPredicted RBP9.09□□□□□ -0.95
HPS4-217ENST00000496385 GIMAP4Q9NUV9 329 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 ACTR3BQ9P1U1 418 aa9.09□□□□□ -0.95
HPS4-217ENST00000496385 BBIP1A8MTZ0 92 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 PDZK1P1A8MUH7 402 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 H7C0C1 242 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 NEMP1O14524 444 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 EI24O14681 340 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 PLA2G6O60733 806 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 NDUFS2O75306 463 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 LRCH4O75427 683 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 CALCAP01258 141 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 APRTP07741 180 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 NAT2P11245 290 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 PCNAP12004 261 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 HOXA13P31271 388 aaPredicted RBP9.08□□□□□ -0.96
HPS4-217ENST00000496385 ATP5OP48047 213 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 CLCNKBP51801 687 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 ZNF45Q02386 682 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 POLD3Q15054 466 aaPredicted RBP9.08□□□□□ -0.96
HPS4-217ENST00000496385 STILQ15468 1287 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 TAF5Q15542 800 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 CCL14Q16627 93 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 YIF1BQ5BJH7 314 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 TTC23Q5W5X9 447 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 CLEC14AQ86T13 490 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 MAP4K3Q8IVH8 894 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 ZNF606Q8WXB4 792 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 RIPOR3Q96MK2 946 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 TWNKQ96RR1 684 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 CENPOQ9BU64 300 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 ZNF717Q9BY31 904 aaPredicted RBP9.08□□□□□ -0.96
HPS4-217ENST00000496385 MMP27Q9H306 513 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 FBXO5Q9UKT4 447 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 MGAMO43451 1857 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 MAGEB16A2A368 324 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 ZNF99A8MXY4 864 aaPredicted RBP9.08□□□□□ -0.96
HPS4-217ENST00000496385 KCNU1A8MYU2 1149 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.08□□□□□ -0.96
HPS4-217ENST00000496385 SNRPB2P08579 225 aaKnown RBP9.08□□□□□ -0.96
HPS4-217ENST00000496385 CFHP08603 1231 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 DDX5P17844 614 aaKnown RBP9.08□□□□□ -0.96
HPS4-217ENST00000496385 TGM2P21980 687 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 ADORA2AP29274 412 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 AXLP30530 894 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 RFC2P35250 354 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 ZACNQ401N2 412 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 ATAD3CQ5T2N8 411 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 B3GNT9Q6UX72 402 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 CATSPER4Q7RTX7 472 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 PLEKHH3Q7Z736 793 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 CCDC103Q8IW40 242 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 CMTR2Q8IYT2 770 aaKnown RBP9.08□□□□□ -0.96
HPS4-217ENST00000496385 GPD1LQ8N335 351 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 KIAA1958Q8N8K9 716 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 PSMA8Q8TAA3 256 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 HTRA1Q92743 480 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 PROX1Q92786 737 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 ACSF2Q96CM8 615 aaPredicted RBP9.08□□□□□ -0.96
HPS4-217ENST00000496385 AURKBQ96GD4 344 aaPredicted RBP9.08□□□□□ -0.96
HPS4-217ENST00000496385 RHOBTB2Q9BYZ6 727 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 ASPSCR1Q9BZE9 553 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 EPS8L2Q9H6S3 715 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 TNFRSF10DQ9UBN6 386 aa9.08□□□□□ -0.96
HPS4-217ENST00000496385 MRASO14807 208 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 B4GALT4O60513 344 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 CFBP00751 764 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 CHRNA1P02708 482 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 YES1P07947 543 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 KRT19P08727 400 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 MPSTP25325 297 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 SPRP35270 261 aaPredicted RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 PTGS2P35354 604 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 ETFBP38117 255 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 HADHAP40939 763 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 HTR3AP46098 478 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 RAP1GAPP47736 663 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 ATP4BP51164 291 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 SLC13A2Q13183 592 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 SEMA5AQ13591 1074 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms