RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 GKN2Q86XP6 184 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 CCDC13Q8IYE1 715 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 PLD5Q8N7P1 536 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 TPCN2Q8NHX9 752 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 WDR48Q8TAF3 677 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.74■□□□□ 0.11
HDAC4-213ENST00000496347 GRAMD1AQ96CP6 724 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 RNF157Q96PX1 679 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 TRIM5Q9C035 493 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 CLPBQ9H078 707 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 ABCG4Q9H172 646 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 FGF22Q9HCT0 170 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 RPL26L1Q9UNX3 145 aaKnown RBP15.74■□□□□ 0.11
HDAC4-213ENST00000496347 RAXQ9Y2V3 346 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 GPSM3Q9Y4H4 160 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 TTLL3Q9Y4R7 772 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 ADAMTS20P59510 1910 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 CAPN8A6NHC0 703 aa15.73■□□□□ 0.11
HDAC4-213ENST00000496347 C3orf70A6NLC5 250 aaPredicted RBP15.73■□□□□ 0.11
HDAC4-213ENST00000496347 YY2O15391 372 aa15.73■□□□□ 0.11
HDAC4-213ENST00000496347 TCEA3O75764 348 aa15.73■□□□□ 0.11
HDAC4-213ENST00000496347 MAP3K6O95382 1288 aa15.73■□□□□ 0.11
HDAC4-213ENST00000496347 KRT1P04264 644 aa15.73■□□□□ 0.11
HDAC4-213ENST00000496347 HLA-DQB2P05538 268 aa15.73■□□□□ 0.11
HDAC4-213ENST00000496347 CELA2BP08218 269 aaPredicted RBP15.73■□□□□ 0.11
HDAC4-213ENST00000496347 MYF5P13349 255 aa15.73■□□□□ 0.11
HDAC4-213ENST00000496347 ZFXP17010 805 aaPredicted RBP15.73■□□□□ 0.11
HDAC4-213ENST00000496347 ZNF30P17039 623 aa15.73■□□□□ 0.11
HDAC4-213ENST00000496347 IFI35P80217 286 aaPredicted RBP15.73■□□□□ 0.11
HDAC4-213ENST00000496347 ITKQ08881 620 aa15.73■□□□□ 0.11
HDAC4-213ENST00000496347 C1orf61Q13536 156 aa15.73■□□□□ 0.11
HDAC4-213ENST00000496347 RHOT1Q8IXI2 618 aa15.73■□□□□ 0.11
HDAC4-213ENST00000496347 KYQ8NBH2 561 aa15.73■□□□□ 0.11
HDAC4-213ENST00000496347 PIH1D2Q8WWB5 315 aa15.73■□□□□ 0.11
HDAC4-213ENST00000496347 TSACCQ96A04 125 aaPredicted RBP15.73■□□□□ 0.11
HDAC4-213ENST00000496347 PHPT1Q9NRX4 125 aaPredicted RBP15.73■□□□□ 0.11
HDAC4-213ENST00000496347 RBM22Q9NW64 420 aaKnown RBP eCLIP15.73■□□□□ 0.111e-7■■■■■ 30.3
HDAC4-213ENST00000496347 DDX56Q9NY93 547 aaKnown RBP15.73■□□□□ 0.11
HDAC4-213ENST00000496347 A0A087WV48 116 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 A0A0J9YYE9 177 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 CPED1A4D0V7 1026 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 A8MX80 341 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 APOL1O14791 398 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 PPP1R12AO14974 1030 aaPredicted RBP15.72■□□□□ 0.11
HDAC4-213ENST00000496347 PSTPIP1O43586 416 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 TNFP01375 233 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 TRBC1P01850 177 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 ETV3P41162 512 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 EPHB1P54762 984 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 HADHBP55084 474 aaKnown RBP15.72■□□□□ 0.11
HDAC4-213ENST00000496347 DSC2Q02487 901 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 DPTQ07507 201 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 PDK1Q15118 436 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 ODF2Q5BJF6 829 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 LRRC66Q68CR7 880 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 RD3Q7Z3Z2 195 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 HSD11B1LQ7Z5J1 315 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 HEATR4Q86WZ0 1026 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 RAVER1Q8IY67 606 aaKnown RBP15.72■□□□□ 0.11
HDAC4-213ENST00000496347 CBARPQ8N350 705 aaPredicted RBP15.72■□□□□ 0.11
HDAC4-213ENST00000496347 TC2NQ8N9U0 490 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 OR1E3Q8WZA6 343 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 OLFM3Q96PB7 478 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 TEX101Q9BY14 249 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 LUC7LQ9NQ29 371 aaKnown RBP15.72■□□□□ 0.11
HDAC4-213ENST00000496347 AK5Q9Y6K8 562 aa15.72■□□□□ 0.11
HDAC4-213ENST00000496347 ZFC3H1O60293 1989 aaKnown RBP15.72■□□□□ 0.11
HDAC4-213ENST00000496347 PRSS38A1L453 326 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 TMEM202A6NGA9 273 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 SPOPO43791 374 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 CSO75390 466 aaKnown RBP15.71■□□□□ 0.11
HDAC4-213ENST00000496347 LCA5LO95447 670 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 PYGLP06737 847 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 PDHA1P08559 390 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 CDK3Q00526 305 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 SLC10A2Q12908 348 aaPredicted RBP15.71■□□□□ 0.11
HDAC4-213ENST00000496347 RAET1GQ6H3X3 334 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 RBM44Q6ZP01 1051 aaKnown RBP15.71■□□□□ 0.11
HDAC4-213ENST00000496347 ZNF765Q7L2R6 523 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 TSPAN33Q86UF1 283 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 CCDC170Q8IYT3 715 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 CCNYQ8ND76 341 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 OR6C4Q8NGE1 309 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 SNIP1Q8TAD8 396 aaKnown RBP15.71■□□□□ 0.11
HDAC4-213ENST00000496347 ARRDC2Q8TBH0 407 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 LYSMD1Q96S90 227 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 LGMNQ99538 433 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 MAK16Q9BXY0 300 aaKnown RBP15.71■□□□□ 0.11
HDAC4-213ENST00000496347 BRD8Q9H0E9 1235 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 PADI4Q9UM07 663 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 GPR34Q9UPC5 381 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 HEY1Q9Y5J3 304 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 BPTFQ12830 3046 aa15.71■□□□□ 0.11
HDAC4-213ENST00000496347 KCNK1O00180 336 aa15.7■□□□□ 0.1
HDAC4-213ENST00000496347 BRINP1O60477 761 aa15.7■□□□□ 0.1
HDAC4-213ENST00000496347 CTPS1P17812 591 aa15.7■□□□□ 0.1
HDAC4-213ENST00000496347 COMTP21964 271 aa15.7■□□□□ 0.1
HDAC4-213ENST00000496347 TGM2P21980 687 aa15.7■□□□□ 0.1
HDAC4-213ENST00000496347 ISXQ2M1V0 245 aa15.7■□□□□ 0.1
HDAC4-213ENST00000496347 DENND2CQ68D51 928 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms