RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 SQORQ9Y6N5 450 aa11.97□□□□□ -0.49
HCN3-204ENST00000496230 THSD7BQ9C0I4 1608 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 NUP214P35658 2090 aaPredicted RBP11.96□□□□□ -0.49
HCN3-204ENST00000496230 SUPT3HB4E1H0 165 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 H3BMM5 538 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 TMEM189-UBE2V1I3L0A0 370 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 CDC7O00311 574 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 PITPNM1O00562 1244 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 TGM5O43548 720 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 PEX11AO75192 247 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 MTX2O75431 263 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 KATNA1O75449 491 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 SUPT3HO75486 399 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 TRIM16O95361 564 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 S1PR4O95977 384 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 LAMA1P25391 3075 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 RPL14P50914 215 aaKnown RBP11.96□□□□□ -0.49
HCN3-204ENST00000496230 RABGAP1LQ5R372 815 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 ZNF549Q6P9A3 640 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 RFLNAQ6ZTI6 216 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 SCUBE1Q8IWY4 988 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 TMEM151AQ8N4L1 468 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 KLHL23Q8NBE8 558 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 OR4L1Q8NH43 312 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 ACMSDQ8TDX5 336 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 CDKN2AIPNLQ96HQ2 116 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 FAM210AQ96ND0 272 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 CDH19Q9H159 772 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 LINC00597Q9H2U6 94 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 GRXCR1A8MXD5 290 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 STX7O15400 261 aaKnown RBP11.96□□□□□ -0.49
HCN3-204ENST00000496230 EPHB3P54753 998 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 ARF5P84085 180 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 IL10RBQ08334 325 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 TAF11Q15544 211 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 N4BP2L2Q92802 583 aaPredicted RBP11.96□□□□□ -0.49
HCN3-204ENST00000496230 GPR21Q99679 349 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 SLC7A8Q9UHI5 535 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 RAD54BQ9Y620 910 aa11.96□□□□□ -0.49
HCN3-204ENST00000496230 ANTXRLA6NF34 631 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 TGDSO95455 350 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 HOXC13P31276 330 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 MC4RP32245 332 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 PTDSS1P48651 473 aaKnown RBP11.96□□□□□ -0.5
HCN3-204ENST00000496230 TRAF2Q12933 501 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 ARHGEF6Q15052 776 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 CYTH1Q15438 398 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 UGP2Q16851 508 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 LIPMQ5VYY2 423 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 SLC8B1Q6J4K2 584 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 GK5Q6ZS86 529 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 ULK2Q8IYT8 1036 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 C2CD4AQ8NCU7 369 aaPredicted RBP11.96□□□□□ -0.5
HCN3-204ENST00000496230 VWCEQ96DN2 955 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 CCDC106Q9BWC9 280 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 MRPL46Q9H2W6 279 aaKnown RBP11.96□□□□□ -0.5
HCN3-204ENST00000496230 CATSPERZQ9NTU4 200 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 POLR3BQ9NW08 1133 aaPredicted RBP11.96□□□□□ -0.5
HCN3-204ENST00000496230 SLCO3A1Q9UIG8 710 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 INSL5Q9Y5Q6 135 aa11.96□□□□□ -0.5
HCN3-204ENST00000496230 FGF18O76093 207 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 KLHL2O95198 593 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 GRK2P25098 689 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 CD70P32970 193 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 CA5AP35218 305 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 COPAP53621 1224 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 FOXA1P55317 472 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 C1QTNF8P60827 252 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 CCDC15Q0P6D6 951 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 TSNQ15631 228 aaKnown RBP11.95□□□□□ -0.5
HCN3-204ENST00000496230 LYSMD3Q7Z3D4 306 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 TMEM150AQ86TG1 271 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 LSMEM2Q8N112 164 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 PTGR2Q8N8N7 351 aaPredicted RBP11.95□□□□□ -0.5
HCN3-204ENST00000496230 TOP1MTQ969P6 601 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 BOCQ9BWV1 1114 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 PAK6Q9NQU5 681 aaPredicted RBP11.95□□□□□ -0.5
HCN3-204ENST00000496230 VPS45Q9NRW7 570 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 GMPR2Q9P2T1 348 aaKnown RBP11.95□□□□□ -0.5
HCN3-204ENST00000496230 ZNF212Q9UDV6 495 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 SEPT3Q9UH03 358 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 IKZF3Q9UKT9 509 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 A0A1W2PQ67 120 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 E5RI56 91 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 BTN3A1O00481 513 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 KLF11O14901 512 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 HOXA2O43364 376 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 TBC1D4O60343 1298 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 TBX10O75333 385 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 GPC4O75487 556 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 LRG1P02750 347 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 SOD2P04179 222 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 SERPINA6P08185 405 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 LINC00032P0C843 101 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 ERVFC1P60507 584 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 NKX3-2P78367 333 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 MUM1Q2TAK8 710 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 PARP15Q460N3 678 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 SGO1Q5FBB7 561 aa11.95□□□□□ -0.5
HCN3-204ENST00000496230 BBS5Q8N3I7 341 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms