RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 ZNF284Q2VY69 593 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 CCDC70Q6NSX1 233 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 GLT6D1Q7Z4J2 308 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 TMC3Q7Z5M5 1100 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 TMEFF1Q8IYR6 380 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 OR13C4Q8NGS5 318 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 CXorf40AQ8TE69 158 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 GAB3Q8WWW8 586 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 BIRC7Q96CA5 298 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 COQ10AQ96MF6 247 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 ORAI3Q9BRQ5 295 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 PREBQ9HCU5 417 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 BPIFA1Q9NP55 256 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 FZD3Q9NPG1 666 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 GDF3Q9NR23 364 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 ZSCAN32Q9NX65 697 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 CD84Q9UIB8 345 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 CCL22O00626 93 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 RAD51BO15315 384 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 LILRB5O75023 590 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 RPP40O75818 363 aaKnown RBP13.49□□□□□ -0.25
PTPN7-218ENST00000496197 ETV3P41162 512 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 TNNT3P45378 269 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-218ENST00000496197 STC1P52823 247 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 RPL6Q02878 288 aaKnown RBP13.49□□□□□ -0.25
PTPN7-218ENST00000496197 DHX9Q08211 1270 aaKnown RBP13.49□□□□□ -0.25
PTPN7-218ENST00000496197 SEPT6Q14141 434 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 FASTKD3Q14CZ7 662 aaKnown RBP13.49□□□□□ -0.25
PTPN7-218ENST00000496197 HP1BP3Q5SSJ5 553 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-218ENST00000496197 Q6ZVL8 140 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 TECPR1Q7Z6L1 1165 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 TRIM69Q86WT6 500 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 HORMAD1Q86X24 394 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 IGDCC3Q8IVU1 814 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 GSPT2Q8IYD1 628 aaKnown RBP13.49□□□□□ -0.25
PTPN7-218ENST00000496197 SPACA7Q96KW9 195 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 SIGLEC10Q96LC7 697 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 KDM4CQ9H3R0 1056 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 ZFYVE1Q9HBF4 777 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.49□□□□□ -0.25
PTPN7-218ENST00000496197 SLC2A6Q9UGQ3 507 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 R4GN57 208 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 VPS13AQ96RL7 3174 aa13.49□□□□□ -0.25
PTPN7-218ENST00000496197 LRRC72A6NJI9 287 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 WNT9AO14904 365 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 GPR39O43194 453 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 LATO43561 262 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 RECQL5O94762 991 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 FSBPO95073 299 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 MYBL2P10244 700 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 MLNP12872 115 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 ZNF30P17039 623 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 MAOBP27338 520 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 CA5AP35218 305 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 PTGER3P43115 390 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 ZNF140P52738 457 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 CCDC15Q0P6D6 951 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 SFSWAPQ12872 951 aaKnown RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 CALCOCO2Q13137 446 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 ARHGEF7Q14155 803 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 TAF1AQ15573 450 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 ERCC6LQ2NKX8 1250 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 KIAA0895LQ68EN5 471 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 KIAA1161Q6NSJ0 714 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 CES3Q6UWW8 571 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 ARMCX6Q7L4S7 300 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 NDUFAF2Q8N183 169 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 GPR26Q8NDV2 337 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 BRSK1Q8TDC3 778 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 IFT81Q8WYA0 676 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 FUBP1Q96AE4 644 aaKnown RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 MYOCQ99972 504 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 C1QTNF2Q9BXJ5 285 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 FAM126AQ9BYI3 521 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 GPR63Q9BZJ6 419 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 DUSP15Q9H1R2 295 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 PLAC1Q9HBJ0 212 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 CHRAC1Q9NRG0 131 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 IL17CQ9P0M4 197 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 CA5BQ9Y2D0 317 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 TCAF1Q9Y4C2 921 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 MROH6A6NGR9 719 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 METTL12A8MUP2 240 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 GAPDHSO14556 408 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 NDUFS2O75306 463 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 TM7SF2O76062 418 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 PAK4O96013 591 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 BPIP17213 487 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 NMBRP28336 390 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 HMGCLP35914 325 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 SPINT3P49223 89 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 ARSDP51689 593 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 NUBP1P53384 320 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 RPS21P63220 83 aaKnown RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 TMPRSS15P98073 1019 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 CREB5Q02930 508 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 ACOX1Q15067 660 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 PLK5Q496M5 336 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 UBAP2Q5T6F2 1119 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms