RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 LIPIQ6XZB0 460 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 KDM7AQ6ZMT4 941 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 USP45Q70EL2 814 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 VSIG1Q86XK7 387 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 CPNE8Q86YQ8 564 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 RHOT1Q8IXI2 618 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 FSTL5Q8N475 847 aaPredicted RBP10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 SCG3Q8WXD2 468 aaKnown RBP10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 SPOCK2Q92563 424 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 RAPGEF5Q92565 580 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 MAML1Q92585 1016 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 TTC9Q92623 222 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 FATE1Q969F0 183 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 FAF2Q96CS3 445 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 APOLD1Q96LR9 279 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 TSGA13Q96PP4 275 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 RNF157Q96PX1 679 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 SEMA3CQ99985 751 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 ABCG4Q9H172 646 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 RBM22Q9NW64 420 aaKnown RBP eCLIP10.51□□□□□ -0.736e-7■■■■□ 20.6
ERGIC3-219ENST00000496172 DDX56Q9NY93 547 aaKnown RBP10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 B4GALT6Q9UBX8 382 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 KLF15Q9UIH9 416 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 SALL4Q9UJQ4 1053 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 TTLL3Q9Y4R7 772 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 OR1A2Q9Y585 309 aa10.51□□□□□ -0.73
ERGIC3-219ENST00000496172 LRRK2Q5S007 2527 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 PDE2AO00408 941 aaPredicted RBP10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 APOL1O14791 398 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 SPOPO43791 374 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 BRINP1O60477 761 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 PGLSO95336 258 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 MAP3K6O95382 1288 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 TNFP01375 233 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 KRT1P04264 644 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 GP1BAP07359 652 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 ALPIP09923 528 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 GIMD1P0DJR0 217 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 TNNT1P13805 278 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 CCNB1P14635 433 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 KELP23276 732 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 CYLC1P35663 651 aaPredicted RBP10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 HK3P52790 923 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 EPHB1P54762 984 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 TMPRSS3P57727 454 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 SRP54P61011 504 aaKnown RBP10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 GBE1Q04446 702 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 TRAF2Q12933 501 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 C1orf61Q13536 156 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 TCEAL1Q15170 157 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 NR0B2Q15466 257 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 DEFB133Q30KQ1 61 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 DENND2CQ68D51 928 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 RD3Q7Z3Z2 195 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 HID1Q8IV36 788 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 CCDC13Q8IYE1 715 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 CCDC170Q8IYT3 715 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 RBFAQ8N0V3 343 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 PQLC3Q8N755 202 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 TC2NQ8N9U0 490 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 ZNF248Q8NDW4 579 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 TPCN2Q8NHX9 752 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 HDAC11Q96DB2 347 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 SCRN2Q96FV2 425 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 WDR92Q96MX6 357 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 KLQ9UEF7 1012 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 HEY1Q9Y5J3 304 aa10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 ARID1BQ8NFD5 2236 aaPredicted RBP10.5□□□□□ -0.73
ERGIC3-219ENST00000496172 LMO7DNF2Z398 122 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 PSMD11O00231 422 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 PPP1R12AO14974 1030 aaPredicted RBP10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 HEXIM1O94992 359 aaKnown RBP10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 IPO7O95373 1038 aaKnown RBP10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 HOXC4P09017 264 aaPredicted RBP10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 COMTP21964 271 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 KIAA1024LP59773 190 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 INSM1Q01101 510 aaPredicted RBP10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 DSC2Q02487 901 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 ALG11Q2TAA5 492 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 ESRP1Q6NXG1 681 aaKnown RBP10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 PNCKQ6P2M8 343 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 LVRNQ6Q4G3 990 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 BZW1Q7L1Q6 419 aaKnown RBP10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 GKN2Q86XP6 184 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 RFX6Q8HWS3 928 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 SDR16C5Q8N3Y7 309 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 OR56A4Q8NGH8 313 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 IFI44Q8TCB0 444 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 MAPK15Q8TD08 544 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 TSACCQ96A04 125 aaPredicted RBP10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 NUS1Q96E22 293 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 MED8Q96G25 268 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 MRFAP1L1Q96HT8 127 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 HIC2Q96JB3 615 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 NSMCE3Q96MG7 304 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 LRRC61Q9BV99 259 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 TCEAL2Q9H3H9 227 aaPredicted RBP10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 WDR26Q9H7D7 661 aa10.49□□□□□ -0.73
ERGIC3-219ENST00000496172 DTLQ9NZJ0 730 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms