RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 MESDQ14696 234 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 MYLKQ15746 1914 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 NYAP1Q6ZVC0 841 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 CPNE8Q86YQ8 564 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 VSTM4Q8IW00 320 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 FAM46DQ8NEK8 389 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 SLC35G2Q8TBE7 412 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 MAML1Q92585 1016 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 CCDC42Q96M95 316 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 TEX101Q9BY14 249 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 TSPY26PQ9H489 355 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 CYP4F12Q9HCS2 524 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 MRPL40Q9NQ50 206 aaKnown RBP12.75□□□□□ -0.37
PTPRF-214ENST00000496043 ENTPD2Q9Y5L3 495 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 ZFHX4Q86UP3 3567 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 ZZEF1O43149 2961 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 TMX2-CTNND1H3BSU7 103 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 NTN3O00634 580 aaPredicted RBP12.74□□□□□ -0.37
PTPRF-214ENST00000496043 MFSD11O43934 449 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 FZD6O60353 706 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 PDHA1P08559 390 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 MYCLP1P12525 358 aaPredicted RBP12.74□□□□□ -0.37
PTPRF-214ENST00000496043 CCNB1P14635 433 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 CTPS1P17812 591 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 MAN1A1P33908 653 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 ETV3P41162 512 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 ARHGAP25P42331 645 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 EPHB1P54762 984 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 CCDC173Q0VFZ6 552 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 KCTD16Q68DU8 428 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 Q6ZVL8 140 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 HSD11B1LQ7Z5J1 315 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 TECPR1Q7Z6L1 1165 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 PELI3Q8N2H9 469 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 KYQ8NBH2 561 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 CCNYQ8ND76 341 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 ZNF248Q8NDW4 579 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 GPR156Q8NFN8 814 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 CCDC74AQ96AQ1 378 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 FAF2Q96CS3 445 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 DTD2Q96FN9 168 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 PDXPQ96GD0 296 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 ATXN7L3BQ96GX2 97 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 RNF157Q96PX1 679 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 MCCC1Q96RQ3 725 aaPredicted RBP12.74□□□□□ -0.37
PTPRF-214ENST00000496043 CHP1Q99653 195 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 MAK16Q9BXY0 300 aaKnown RBP12.74□□□□□ -0.37
PTPRF-214ENST00000496043 TMEM168Q9H0V1 697 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 DPEP2Q9H4A9 486 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 FGF22Q9HCT0 170 aa12.74□□□□□ -0.37
PTPRF-214ENST00000496043 ASXL3Q9C0F0 2248 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 PRSS38A1L453 326 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 GOLGA6CA6NDK9 693 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 GOLGA6BA6NDN3 693 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 NPIPB15A6NHN6 443 aaPredicted RBP12.73□□□□□ -0.37
PTPRF-214ENST00000496043 MAP3K6O95382 1288 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 CEACAM5P06731 702 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 GOLGA6DP0CG33 693 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 GLB1P16278 677 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 CA4P22748 312 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 LHCGRP22888 699 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 TEAD1P28347 426 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 PCBP4P57723 403 aaKnown RBP12.73□□□□□ -0.37
PTPRF-214ENST00000496043 CCL7P80098 99 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 DSC2Q02487 901 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 PTSQ03393 145 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 DPTQ07507 201 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 SLC10A2Q12908 348 aaPredicted RBP12.73□□□□□ -0.37
PTPRF-214ENST00000496043 PTPRRQ15256 657 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 SOWAHCQ53LP3 525 aaPredicted RBP12.73□□□□□ -0.37
PTPRF-214ENST00000496043 C3orf38Q5JPI3 329 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 RAET1GQ6H3X3 334 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 IGF2-ASQ6U949 168 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 TSPAN33Q86UF1 283 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 NLRP8Q86W28 1048 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 HEATR4Q86WZ0 1026 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 RHOT2Q8IXI1 618 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 CCDC13Q8IYE1 715 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.73□□□□□ -0.37
PTPRF-214ENST00000496043 PQLC3Q8N755 202 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 WDR36Q8NI36 951 aaKnown RBP12.73□□□□□ -0.37
PTPRF-214ENST00000496043 RAPGEF5Q92565 580 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 ZNF830Q96NB3 372 aaPredicted RBP12.73□□□□□ -0.37
PTPRF-214ENST00000496043 SLC46A1Q96NT5 459 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 GFM1Q96RP9 751 aaKnown RBP12.73□□□□□ -0.37
PTPRF-214ENST00000496043 LGMNQ99538 433 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 LRRN3Q9H3W5 708 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 SYNDIG1Q9H7V2 258 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 NHEJ1Q9H9Q4 299 aaPredicted RBP12.73□□□□□ -0.37
PTPRF-214ENST00000496043 CARS2Q9HA77 564 aaKnown RBP12.73□□□□□ -0.37
PTPRF-214ENST00000496043 THSD1Q9NS62 852 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 ABHD10Q9NUJ1 306 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 GOLGA6AQ9NYA3 693 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 DNPEPQ9ULA0 475 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 SATB2Q9UPW6 733 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 CHKBQ9Y259 395 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 PCDHGA8Q9Y5G5 932 aa12.73□□□□□ -0.37
PTPRF-214ENST00000496043 A0A0J9YYE9 177 aa12.72□□□□□ -0.37
PTPRF-214ENST00000496043 JCHAINP01591 159 aa12.72□□□□□ -0.37
PTPRF-214ENST00000496043 TRBC1P01850 177 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms