RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	SLC32A1	Q9H598	525 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	B4GALT6	Q9UBX8	382 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	FAM153A	Q9UHL3	310 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	RSPH14	Q9UHP6	348 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	EIF2B4	Q9UI10	523 aa	Known RBP	11.94	□□□□□ -0.5
APTX-233	ENST00000496030	RPL26L1	Q9UNX3	145 aa	Known RBP	11.94	□□□□□ -0.5
APTX-233	ENST00000496030		A0A1W2PPC4	97 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030		A8MX80	341 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	ANKRD66	B4E2M5	251 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	NDST3	O95803	873 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	PRB1	P04280	392 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	ALPI	P09923	528 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	CTPS1	P17812	591 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	LHCGR	P22888	699 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	CD27	P26842	260 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	MAT2A	P31153	395 aa	Known RBP	11.93	□□□□□ -0.5
APTX-233	ENST00000496030	COIL	P38432	576 aa	Predicted RBP	11.93	□□□□□ -0.5
APTX-233	ENST00000496030	LIG3	P49916	1009 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	RPS21	P63220	83 aa	Known RBP	11.93	□□□□□ -0.5
APTX-233	ENST00000496030	ELP6	Q0PNE2	266 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	MPP3	Q13368	585 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	MSLN	Q13421	630 aa	Predicted RBP	11.93	□□□□□ -0.5
APTX-233	ENST00000496030	OLIG2	Q13516	323 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	PCSK7	Q16549	785 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	TRIM61	Q5EBN2	209 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	CFAP58	Q5T655	872 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	DENND5A	Q6IQ26	1287 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	KIAA1161	Q6NSJ0	714 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	CRTC1	Q6UUV9	634 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	LIPI	Q6XZB0	460 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	TSPAN33	Q86UF1	283 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	ATL2	Q8NHH9	583 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	ASB12	Q8WXK4	309 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	KLK6	Q92876	244 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	LYSMD1	Q96S90	227 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	KLF6	Q99612	283 aa	Predicted RBP	11.93	□□□□□ -0.5
APTX-233	ENST00000496030	WRAP53	Q9BUR4	548 aa	Known RBP	11.93	□□□□□ -0.5
APTX-233	ENST00000496030	FSCN3	Q9NQT6	498 aa		11.93	□□□□□ -0.5
APTX-233	ENST00000496030	URB1	O60287	2271 aa	Known RBP	11.93	□□□□□ -0.5
APTX-233	ENST00000496030	RAD51B	O15315	384 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	PHF2	O75151	1096 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	ANXA9	O76027	345 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	HEXIM1	O94992	359 aa	Known RBP	11.92	□□□□□ -0.5
APTX-233	ENST00000496030	AGT	P01019	485 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	IFNB1	P01574	187 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	ENG	P17813	658 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	XPA	P23025	273 aa	Predicted RBP	11.92	□□□□□ -0.5
APTX-233	ENST00000496030	VIPR1	P32241	457 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	CHRNA4	P43681	627 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	GEM	P55040	296 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	GALNT3	Q14435	633 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	AGER	Q15109	404 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	CNGA3	Q16281	694 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	SIRPB2	Q5JXA9	342 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	WDR45B	Q5MNZ6	344 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	SYCP2L	Q5T4T6	812 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	FAXC	Q5TGI0	409 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	ERAP2	Q6P179	960 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	ARHGEF18	Q6ZSZ5	1173 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	SYT12	Q8IV01	421 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	TAB3	Q8N5C8	712 aa	Predicted RBP	11.92	□□□□□ -0.5
APTX-233	ENST00000496030	LPCAT1	Q8NF37	534 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	MDM1	Q8TC05	714 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	CENPT	Q96BT3	561 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	EID2B	Q96D98	161 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	CRELD1	Q96HD1	420 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	COQ10A	Q96MF6	247 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	SLC17A9	Q9BYT1	436 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	ETNK1	Q9HBU6	452 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	RNF14	Q9UBS8	474 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	TPX2	Q9ULW0	747 aa	Known RBP	11.92	□□□□□ -0.5
APTX-233	ENST00000496030	RAX	Q9Y2V3	346 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	SPO11	Q9Y5K1	396 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	CABIN1	Q9Y6J0	2220 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	PTPRB	P23467	1997 aa		11.92	□□□□□ -0.5
APTX-233	ENST00000496030	ATXN2	Q99700	1313 aa	Known RBP	11.91	□□□□□ -0.5
APTX-233	ENST00000496030	PCDH15	Q96QU1	1955 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030		A0A1W2PR77	199 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	CAPN8	A6NHC0	703 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	MEI4	A8MW99	385 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	NEMP1	O14524	444 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	SLC31A1	O15431	190 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	PAK4	O96013	591 aa	Predicted RBP	11.91	□□□□□ -0.5
APTX-233	ENST00000496030	WNT1	P04628	370 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	C6	P13671	934 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	CA4	P22748	312 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	PTGIR	P43119	386 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	GRIA4	P48058	902 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	BNC1	Q01954	994 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	PTS	Q03393	145 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	SPARCL1	Q14515	664 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	SLC1A5	Q15758	541 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	CCDC137	Q6PK04	289 aa	Known RBP	11.91	□□□□□ -0.5
APTX-233	ENST00000496030	KDM7A	Q6ZMT4	941 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	RFLNA	Q6ZTI6	216 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	HSD11B1L	Q7Z5J1	315 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	TECPR1	Q7Z6L1	1165 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	ZSCAN30	Q86W11	494 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	TMEM145	Q8NBT3	493 aa		11.91	□□□□□ -0.5
APTX-233	ENST00000496030	IPMK	Q8NFU5	416 aa		11.91	□□□□□ -0.5

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