RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 SNAP91O60641 907 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 EDF1O60869 148 aaKnown RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 SNUPNO95149 360 aaKnown RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 TGDSO95455 350 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 GSRP00390 522 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 PENKP01210 267 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 IL1BP01584 269 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 AHSGP02765 367 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 ALDOAP04075 364 aaKnown RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 ASLP04424 464 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 ATXN1LP0C7T5 689 aaKnown RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 POLR2EP19388 210 aaKnown RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 GLDCP23378 1020 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 GRK2P25098 689 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 PMLP29590 882 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 SERPINA4P29622 427 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 ETV4P43268 484 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 MAGEA12P43365 314 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 CHRNA4P43681 627 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 LEPRP48357 1165 aaKnown RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 TMPRSS15P98073 1019 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 PPARDQ03181 441 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 ACVR1Q04771 509 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 LMAN2Q12907 356 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 GRM2Q14416 872 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 SETDB1Q15047 1291 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 FBXO43Q4G163 708 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 FSCBQ5H9T9 825 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 PITRM1Q5JRX3 1037 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 AARS2Q5JTZ9 985 aaKnown RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 DGKKQ5KSL6 1271 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 RNF187Q5TA31 235 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 ZNF470Q6ECI4 717 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 FAM45BPQ6NSW5 357 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 AFTPHQ6ULP2 937 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 PLPP6Q8IY26 295 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 UNC5BQ8IZJ1 945 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 AHI1Q8N157 1196 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 PCDH20Q8N6Y1 951 aaKnown RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 OR52K2Q8NGK3 314 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 TTC8Q8TAM2 541 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 FAM45AQ8TCE6 357 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 WFIKKN2Q8TEU8 576 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 PPP4R1Q8TF05 950 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 HDAC10Q969S8 669 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 RSPRY1Q96DX4 576 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 ALG14Q96F25 216 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 ZNF419Q96HQ0 510 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 ELMO2Q96JJ3 720 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 TRIB3Q96RU7 358 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 AGAP2Q99490 1192 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 RPP25Q9BUL9 199 aaKnown RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 TSSK1BQ9BXA7 367 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 CCDC68Q9H2F9 335 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 MAGEE1Q9HCI5 957 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 CATSPERZQ9NTU4 200 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 INTS10Q9NVR2 710 aaKnown RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 NLE1Q9NVX2 485 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 SLC17A7Q9P2U7 560 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 LHX3Q9UBR4 397 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 SLC39A10Q9ULF5 831 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 MTO1Q9Y2Z2 717 aaKnown RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 PSAT1Q9Y617 370 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 PIAS3Q9Y6X2 628 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 ANKRD36A6QL64 1941 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 MUC6Q6W4X9 2439 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 FAM95CA0A1B0GW59 222 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 KANSL1LA0AUZ9 987 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 CCDC78A2IDD5 438 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 WDR91A4D1P6 747 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 TMEM221A6NGB7 291 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 NEDD8-MDP1E9PL57 170 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 M0R296 226 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 DLL1O00548 723 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 CD3EAPO15446 510 aaKnown RBP10.27□□□□□ -0.77
HDAC3-214ENST00000495485 LDB2O43679 373 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 DCTN3O75935 186 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 POP4O95707 220 aaKnown RBP10.27□□□□□ -0.77
HDAC3-214ENST00000495485 ATP5BP06576 529 aaKnown RBP10.27□□□□□ -0.77
HDAC3-214ENST00000495485 PABPC1P11940 636 aaKnown RBP10.27□□□□□ -0.77
HDAC3-214ENST00000495485 TYRP14679 529 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 DRD1P21728 446 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 SLC26A3P40879 764 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 PTPN5P54829 565 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 HNRNPH2P55795 449 aaKnown RBP10.27□□□□□ -0.77
HDAC3-214ENST00000495485 RAB10P61026 200 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 POLR2LP62875 67 aaKnown RBP10.27□□□□□ -0.77
HDAC3-214ENST00000495485 ZXDBP98169 803 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 ECT2LQ008S8 904 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 STX3Q13277 289 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 PDE1CQ14123 709 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-214ENST00000495485 LRRC32Q14392 662 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 GALNT3Q14435 633 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 FAM83EQ2M2I3 478 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 HSF5Q4G112 596 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-214ENST00000495485 N4BP2L1Q5TBK1 243 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-214ENST00000495485 AGAP9Q5VTM2 703 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 LINGO4Q6UY18 593 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 TBC1D1Q86TI0 1168 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-214ENST00000495485 KIRREL3Q8IZU9 778 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms