RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	PPCS	Q9HAB8	311 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	ITM2C	Q9NQX7	267 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.56	□□□□□ -0.24
APTX-231	ENST00000494973	PIH1D1	Q9NWS0	290 aa	Known RBP	13.56	□□□□□ -0.24
APTX-231	ENST00000494973	APPL1	Q9UKG1	709 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	FADS3	Q9Y5Q0	445 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	UNC80	Q8N2C7	3258 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	TECTA	O75443	2155 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973		H7C0S8	307 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	PFDN6	O15212	129 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	LDB2	O43679	373 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	RPP40	O75818	363 aa	Known RBP	13.55	□□□□□ -0.24
APTX-231	ENST00000494973	DCN	P07585	359 aa	Known RBP	13.55	□□□□□ -0.24
APTX-231	ENST00000494973	MYBL2	P10244	700 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	STC1	P52823	247 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	ADPRH	P54922	357 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	RPS21	P63220	83 aa	Known RBP	13.55	□□□□□ -0.24
APTX-231	ENST00000494973	ACVR1	Q04771	509 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	NAB1	Q13506	487 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	NAA30	Q147X3	362 aa	Predicted RBP	13.55	□□□□□ -0.24
APTX-231	ENST00000494973	CRYM	Q14894	314 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	LONRF1	Q17RB8	773 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	MAP7D1	Q3KQU3	841 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	ANKRD20A4	Q4UJ75	823 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	MSS51	Q4VC12	460 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	DENND2C	Q68D51	928 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	PDPK2P	Q6A1A2	396 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	AFTPH	Q6ULP2	937 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	CRTC1	Q6UUV9	634 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	LYSMD3	Q7Z3D4	306 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	C11orf74	Q86VG3	221 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	CACUL1	Q86Y37	369 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	TTC30B	Q8N4P2	665 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	MDGA1	Q8NFP4	955 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	OR2T34	Q8NGX1	318 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	PLEKHG4B	Q96PX9	1271 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	HHIP	Q96QV1	700 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	TTC1	Q99614	292 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	CCDC77	Q9BR77	488 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	FAM167B	Q9BTA0	163 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	TXLNGY	Q9BZA5	131 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	VPS37B	Q9H9H4	285 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	TREX1	Q9NSU2	369 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	NLE1	Q9NVX2	485 aa	Predicted RBP	13.55	□□□□□ -0.24
APTX-231	ENST00000494973	NSMCE4A	Q9NXX6	385 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	DLGAP2	Q9P1A6	1054 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	SPO11	Q9Y5K1	396 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973	FAM169A	Q9Y6X4	670 aa		13.55	□□□□□ -0.24
APTX-231	ENST00000494973		A0A087WUV0	522 aa	Predicted RBP	13.54	□□□□□ -0.24
APTX-231	ENST00000494973	WNT9A	O14904	365 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	LAMTOR5	O43504	91 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	SLC4A1	P02730	911 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	IVL	P07476	585 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	PIRT	P0C851	137 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	H2AFX	P16104	143 aa	Predicted RBP	13.54	□□□□□ -0.24
APTX-231	ENST00000494973	LHCGR	P22888	699 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	PPARG	P37231	505 aa	Predicted RBP	13.54	□□□□□ -0.24
APTX-231	ENST00000494973	SPAM1	P38567	509 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	TPMT	P51580	245 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	CRADD	P78560	199 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	RALGDS	Q12967	914 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	CNGA3	Q16281	694 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	CDKN3	Q16667	212 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	KLHL38	Q2WGJ6	581 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	AARS2	Q5JTZ9	985 aa	Known RBP	13.54	□□□□□ -0.24
APTX-231	ENST00000494973	SLC36A4	Q6YBV0	504 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	UNC5A	Q6ZN44	842 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	ZNF765	Q7L2R6	523 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	CROCCP2	Q86T23	111 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	ANKMY2	Q8IV38	441 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	MPP5	Q8N3R9	675 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	FBXL6	Q8N531	539 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	OR14C36	Q8NHC7	312 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	ASB12	Q8WXK4	309 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	CFAP36	Q96G28	342 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	SGSM3	Q96HU1	749 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	C9orf72	Q96LT7	481 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	PWWP2A	Q96N64	755 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	FUT8	Q9BYC5	575 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.54	□□□□□ -0.24
APTX-231	ENST00000494973	PRMT8	Q9NR22	394 aa	Predicted RBP	13.54	□□□□□ -0.24
APTX-231	ENST00000494973	CHRAC1	Q9NRG0	131 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.54	□□□□□ -0.24
APTX-231	ENST00000494973	NINJ2	Q9NZG7	142 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	IL17C	Q9P0M4	197 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	VPS9D1	Q9Y2B5	631 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	ARL5A	Q9Y689	179 aa		13.54	□□□□□ -0.24
APTX-231	ENST00000494973	TNFRSF10A	O00220	468 aa		13.53	□□□□□ -0.24
APTX-231	ENST00000494973	DYNC1I1	O14576	645 aa		13.53	□□□□□ -0.24
APTX-231	ENST00000494973	AXIN1	O15169	862 aa		13.53	□□□□□ -0.24
APTX-231	ENST00000494973	LZTS3	O60299	673 aa	Predicted RBP	13.53	□□□□□ -0.24
APTX-231	ENST00000494973	TM7SF2	O76062	418 aa		13.53	□□□□□ -0.24
APTX-231	ENST00000494973	PCDH8	O95206	1070 aa		13.53	□□□□□ -0.24
APTX-231	ENST00000494973	CLDN7	O95471	211 aa		13.53	□□□□□ -0.24
APTX-231	ENST00000494973	PRKCG	P05129	697 aa		13.53	□□□□□ -0.24
APTX-231	ENST00000494973	FAM153B	P0C7A2	387 aa		13.53	□□□□□ -0.24
APTX-231	ENST00000494973	ITGAL	P20701	1170 aa		13.53	□□□□□ -0.24
APTX-231	ENST00000494973	CD6	P30203	668 aa		13.53	□□□□□ -0.24
APTX-231	ENST00000494973	SPINT3	P49223	89 aa		13.53	□□□□□ -0.24
APTX-231	ENST00000494973	LIG3	P49916	1009 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms