RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 ATL2Q8NHH9 583 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 NUS1Q96E22 293 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 CAPZA3Q96KX2 299 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 SMIM14Q96QK8 99 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 TBL1YQ9BQ87 522 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 GORASP1Q9BQQ3 440 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 GPR63Q9BZJ6 419 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 MAGEE1Q9HCI5 957 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 GDF3Q9NR23 364 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 PCDH15Q96QU1 1955 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 VPS13AQ96RL7 3174 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 POM121BA6NF01 834 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 H0Y8X5 98 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 TOR1BO14657 336 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 CLDN7O95471 211 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 AGTP01019 485 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 PCCBP05166 539 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 PIRTP0C851 137 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 IGFALSP35858 605 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 PAFAH1B1P43034 410 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 RABIFP47224 123 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 LMAN1P49257 510 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 STC1P52823 247 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 FAXCQ5TGI0 409 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 SYT10Q6XYQ8 523 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 Q6ZSR6 202 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 MINDY1Q8N5J2 469 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 OR13H1Q8NG92 308 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 DTD2Q96FN9 168 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 LRRC40Q9H9A6 602 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 ZFYVE1Q9HBF4 777 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 TMEM9BQ9NQ34 198 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 MBNL1Q9NR56 388 aaKnown RBP12.48□□□□□ -0.41
TRA2A-209ENST00000494255 PKD2L2Q9NZM6 624 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 HACD3Q9P035 362 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 ZNF711Q9Y462 761 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 SNX11Q9Y5W9 270 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 FAM186AA6NE01 2351 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 TP53BP1Q12888 1972 aaPredicted RBP12.47□□□□□ -0.41
TRA2A-209ENST00000494255 A0A0U1RQS6 177 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.47□□□□□ -0.41
TRA2A-209ENST00000494255 E7EVH7 732 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 DFNA5O60443 496 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 PHF2O75151 1096 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 METTL18O95568 372 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 SLC4A1P02730 911 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 C1SP09871 688 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 ATXN1LP0C7T5 689 aaKnown RBP12.47□□□□□ -0.41
TRA2A-209ENST00000494255 ETS1P14921 441 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 HOXD11P31277 338 aaPredicted RBP12.47□□□□□ -0.41
TRA2A-209ENST00000494255 ADRA1AP35348 466 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 COILP38432 576 aaPredicted RBP12.47□□□□□ -0.41
TRA2A-209ENST00000494255 ETV3P41162 512 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 CTSKP43235 329 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 CHRNA4P43681 627 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 THOP1P52888 689 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 NXPH1P58417 271 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 BNC1Q01954 994 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 PTSQ03393 145 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 MTM1Q13496 603 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 CYP1B1Q16678 543 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 Q6ZVL8 140 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 LYSMD3Q7Z3D4 306 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 RAVER1Q8IY67 606 aaKnown RBP12.47□□□□□ -0.41
TRA2A-209ENST00000494255 NETO1Q8TDF5 533 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 GRK7Q8WTQ7 553 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 BMFQ96LC9 184 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 C16orf45Q96MC5 204 aaPredicted RBP12.47□□□□□ -0.41
TRA2A-209ENST00000494255 TRABDQ9H4I3 376 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 GAREM1Q9H706 876 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 RXFP3Q9NSD7 469 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 RNF14Q9UBS8 474 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 FEZ2Q9UHY8 353 aaPredicted RBP12.47□□□□□ -0.41
TRA2A-209ENST00000494255 SHOC2Q9UQ13 582 aa12.47□□□□□ -0.41
TRA2A-209ENST00000494255 ERI2A8K979 691 aaKnown RBP12.46□□□□□ -0.41
TRA2A-209ENST00000494255 GDF9O60383 454 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 GM2AP17900 193 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 RPL22P35268 128 aaKnown RBP12.46□□□□□ -0.41
TRA2A-209ENST00000494255 FNTAP49354 379 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 PFN3P60673 137 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 YPEL5P62699 121 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 PTK2BQ14289 1009 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 SPARCL1Q14515 664 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 HLA-BQ31612 363 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 STPG1Q5TH74 334 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 CCDC137Q6PK04 289 aaKnown RBP12.46□□□□□ -0.41
TRA2A-209ENST00000494255 RANBP10Q6VN20 620 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 ZNF765Q7L2R6 523 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 TECPR1Q7Z6L1 1165 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 PRUNE1Q86TP1 453 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 LINC00523Q86TU6 105 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 KLHDC8BQ8IXV7 354 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 NRSN1Q8IZ57 195 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 CBARPQ8N350 705 aaPredicted RBP12.46□□□□□ -0.41
TRA2A-209ENST00000494255 OXR1Q8N573 874 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 PDCD7Q8N8D1 485 aaKnown RBP12.46□□□□□ -0.41
TRA2A-209ENST00000494255 BLOC1S5Q8TDH9 187 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 APOL2Q9BQE5 337 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 ETNK1Q9HBU6 452 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 RAB6BQ9NRW1 208 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms