RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ANAPC5Q9UJX4 755 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 C2orf81A6NN90 581 aa14.56□□□□□ -0.08
BRCA1-223ENST00000494123 SMAPO00193 183 aa14.56□□□□□ -0.08
BRCA1-223ENST00000494123 LATO43561 262 aa14.56□□□□□ -0.08
BRCA1-223ENST00000494123 RECQL5O94762 991 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-223ENST00000494123 SEC31AO94979 1220 aaKnown RBP14.56□□□□□ -0.08
BRCA1-223ENST00000494123 PAK4O96013 591 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-223ENST00000494123 IVDP26440 423 aa14.56□□□□□ -0.08
BRCA1-223ENST00000494123 RPL21P46778 160 aaKnown RBP14.56□□□□□ -0.08
BRCA1-223ENST00000494123 ITGA8P53708 1063 aa14.56□□□□□ -0.08
BRCA1-223ENST00000494123 SESN2P58004 480 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-223ENST00000494123 PTSQ03393 145 aa14.56□□□□□ -0.08
BRCA1-223ENST00000494123 POU6F1Q14863 301 aa14.56□□□□□ -0.08
BRCA1-223ENST00000494123 LRRC8BQ6P9F7 803 aa14.56□□□□□ -0.08
BRCA1-223ENST00000494123 HSD11B1LQ7Z5J1 315 aa14.56□□□□□ -0.08
BRCA1-223ENST00000494123 MCUQ8NE86 351 aa14.56□□□□□ -0.08
BRCA1-223ENST00000494123 BRSK1Q8TDC3 778 aa14.56□□□□□ -0.08
BRCA1-223ENST00000494123 EPC1Q9H2F5 836 aa14.56□□□□□ -0.08
BRCA1-223ENST00000494123 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.56□□□□□ -0.08
BRCA1-223ENST00000494123 PKD2L2Q9NZM6 624 aa14.56□□□□□ -0.08
BRCA1-223ENST00000494123 BFARQ9NZS9 450 aa14.56□□□□□ -0.08
BRCA1-223ENST00000494123 EIF2B4Q9UI10 523 aaKnown RBP14.56□□□□□ -0.08
BRCA1-223ENST00000494123 DMTF1Q9Y222 760 aa14.56□□□□□ -0.08
BRCA1-223ENST00000494123 A0A1W2PPC4 97 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 WNT9AO14904 365 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 AURKAO14965 403 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 C1SP09871 688 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 CD27P26842 260 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 AKT2P31751 481 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 ETV3P41162 512 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 STC1P52823 247 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 PDE1BQ01064 536 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 TAF1AQ15573 450 aaPredicted RBP14.55□□□□□ -0.08
BRCA1-223ENST00000494123 CDKN3Q16667 212 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 CERCAMQ5T4B2 595 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 DUPD1Q68J44 220 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 ASB12Q8WXK4 309 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 NUS1Q96E22 293 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 SERAC1Q96JX3 654 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 COQ10AQ96MF6 247 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 MYOCQ99972 504 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 FAM86C1Q9NVL1 165 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 KCTD5Q9NXV2 234 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 WHRNQ9P202 907 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 SMG5Q9UPR3 1016 aaKnown RBP14.55□□□□□ -0.08
BRCA1-223ENST00000494123 PKP3Q9Y446 797 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 CACNA1HO95180 2353 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 MYLKQ15746 1914 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 C10orf142B7Z368 130 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 PRAMEF26H0Y7S4 382 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 STX7O15400 261 aaKnown RBP14.55□□□□□ -0.08
BRCA1-223ENST00000494123 MLNP12872 115 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 LPOP22079 712 aaPredicted RBP14.55□□□□□ -0.08
BRCA1-223ENST00000494123 HNRNPA2B1P22626 353 aaKnown RBP14.55□□□□□ -0.08
BRCA1-223ENST00000494123 ITPKAP23677 461 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 MAOBP27338 520 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 HMGCLP35914 325 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 NPY2RP49146 381 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 GUCY2DQ02846 1103 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 LAMB3Q13751 1172 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 FGL2Q14314 439 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 LRRC14Q15048 493 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 HIBCHQ6NVY1 386 aaPredicted RBP14.55□□□□□ -0.08
BRCA1-223ENST00000494123 Q6ZVL8 140 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 ZNF534Q76KX8 674 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 CYP2U1Q7Z449 544 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 TMC3Q7Z5M5 1100 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 TTC30BQ8N4P2 665 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 PPHLN1Q8NEY8 458 aaKnown RBP14.55□□□□□ -0.08
BRCA1-223ENST00000494123 DTD2Q96FN9 168 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 SERPINB12Q96P63 405 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 HINFPQ9BQA5 517 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 FRMD8Q9BZ67 464 aaPredicted RBP14.55□□□□□ -0.08
BRCA1-223ENST00000494123 IL22Q9GZX6 179 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 EBF2Q9HAK2 575 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 BPIFA1Q9NP55 256 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 FZD3Q9NPG1 666 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 CD84Q9UIB8 345 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 ARL5AQ9Y689 179 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 DOCK9Q9BZ29 2069 aa14.55□□□□□ -0.08
BRCA1-223ENST00000494123 PLXNA2O75051 1894 aa14.54□□□□□ -0.08
BRCA1-223ENST00000494123 HEATR9A2RTY3 570 aa14.54□□□□□ -0.08
BRCA1-223ENST00000494123 BUD23O43709 281 aaKnown RBP14.54□□□□□ -0.08
BRCA1-223ENST00000494123 AVILO75366 819 aa14.54□□□□□ -0.08
BRCA1-223ENST00000494123 MGAT1P26572 445 aa14.54□□□□□ -0.08
BRCA1-223ENST00000494123 DPP6P42658 865 aa14.54□□□□□ -0.08
BRCA1-223ENST00000494123 SPINT3P49223 89 aa14.54□□□□□ -0.08
BRCA1-223ENST00000494123 CREB5Q02930 508 aa14.54□□□□□ -0.08
BRCA1-223ENST00000494123 MTM1Q13496 603 aa14.54□□□□□ -0.08
BRCA1-223ENST00000494123 AGERQ15109 404 aa14.54□□□□□ -0.08
BRCA1-223ENST00000494123 CCDC38Q502W7 563 aa14.54□□□□□ -0.08
BRCA1-223ENST00000494123 CAND1Q86VP6 1230 aaKnown RBP14.54□□□□□ -0.08
BRCA1-223ENST00000494123 RAVER1Q8IY67 606 aaKnown RBP14.54□□□□□ -0.08
BRCA1-223ENST00000494123 NRSN1Q8IZ57 195 aa14.54□□□□□ -0.08
BRCA1-223ENST00000494123 CBARPQ8N350 705 aaPredicted RBP14.54□□□□□ -0.08
BRCA1-223ENST00000494123 DENND6BQ8NEG7 585 aa14.54□□□□□ -0.08
BRCA1-223ENST00000494123 DNASE2BQ8WZ79 361 aa14.54□□□□□ -0.08
BRCA1-223ENST00000494123 AASDHPPTQ9NRN7 309 aa14.54□□□□□ -0.08
BRCA1-223ENST00000494123 RAD18Q9NS91 495 aa14.54□□□□□ -0.08
BRCA1-223ENST00000494123 TNRC6BQ9UPQ9 1833 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms