RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 TANKQ92844 425 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 KIF1BPQ96EK5 621 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 ZNF570Q96NI8 536 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 IFIH1Q9BYX4 1025 aaKnown RBP4.29□□□□□ -1.72
ITGB1-216ENST00000493758 TKTL2Q9H0I9 626 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 KCNN2Q9H2S1 579 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 LTB4R2Q9NPC1 389 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 CTNNAL1Q9UBT7 734 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 ZNF112Q9UJU3 913 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 ERVK-11Q9UQG0 969 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 AAR2Q9Y312 384 aaKnown RBP4.29□□□□□ -1.72
ITGB1-216ENST00000493758 NOTCH4Q99466 2003 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 IGHV4OR15-8A0A075B7B6 117 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 LRRC53A6NM62 1247 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 TULP2O00295 520 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 MID1O15344 667 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 CLDN14O95500 239 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 CYC1P08574 325 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 MCM3P25205 808 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 HNRNPH2P55795 449 aaKnown RBP4.28□□□□□ -1.72
ITGB1-216ENST00000493758 OLIG2Q13516 323 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 FGFBP1Q14512 234 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 ZNF718Q3SXZ3 478 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 FAM69AQ5T7M9 428 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 GGNBP1Q5YKI7 109 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 KCTD18Q6PI47 426 aaPredicted RBP4.28□□□□□ -1.72
ITGB1-216ENST00000493758 TUBA1AQ71U36 451 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 TDRPQ86YL5 185 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 DSELQ8IZU8 1212 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 PCYOX1LQ8NBM8 494 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 SORCS1Q8WY21 1168 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 PABPC5Q96DU9 382 aaKnown RBP4.28□□□□□ -1.72
ITGB1-216ENST00000493758 TUBA1CQ9BQE3 449 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 RANBP17Q9H2T7 1088 aaKnown RBP4.28□□□□□ -1.72
ITGB1-216ENST00000493758 PPP1R3EQ9H7J1 279 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 PREBQ9HCU5 417 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 HINT3Q9NQE9 182 aaKnown RBP4.28□□□□□ -1.72
ITGB1-216ENST00000493758 KLHL1Q9NR64 748 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 PLSCR4Q9NRQ2 329 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 INTS6Q9UL03 887 aaKnown RBP4.28□□□□□ -1.72
ITGB1-216ENST00000493758 ARHGAP26Q9UNA1 814 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 NAALADL1Q9UQQ1 740 aa4.28□□□□□ -1.72
ITGB1-216ENST00000493758 SAA2-SAA4A0A096LPE2 208 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 NPIPB15A6NHN6 443 aaPredicted RBP4.27□□□□□ -1.73
ITGB1-216ENST00000493758 CREB3O43889 395 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 BSGP35613 385 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 EIF2S3P41091 472 aaKnown RBP4.27□□□□□ -1.73
ITGB1-216ENST00000493758 GNAQP50148 359 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 RPL7AP62424 266 aaKnown RBP4.27□□□□□ -1.73
ITGB1-216ENST00000493758 NEXNQ0ZGT2 675 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 CTF1Q16619 201 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 C2orf68Q2NKX9 166 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 HSP90AB4PQ58FF6 505 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 CDC73Q6P1J9 531 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 FBXO46Q6PJ61 603 aaPredicted RBP4.27□□□□□ -1.73
ITGB1-216ENST00000493758 UNQ6126/PRO20091Q6UXV3 157 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 KRBA2Q6ZNG9 492 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 PQLC2Q6ZP29 291 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 SPATA6LQ8N4H0 392 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 SPATA3Q8NHX4 192 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 RFFLQ8WZ73 363 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 ZUFSPQ96AP4 578 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 FAM149B1Q96BN6 582 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 RRP36Q96EU6 259 aaKnown RBP4.27□□□□□ -1.73
ITGB1-216ENST00000493758 MAP7D2Q96T17 732 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 SEC62Q99442 399 aaKnown RBP4.27□□□□□ -1.73
ITGB1-216ENST00000493758 UNC45AQ9H3U1 944 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 EVA1AQ9H8M9 152 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 SLC6A13Q9NSD5 602 aa4.27□□□□□ -1.73
ITGB1-216ENST00000493758 C9orf78Q9NZ63 289 aaPredicted RBP4.27□□□□□ -1.73
ITGB1-216ENST00000493758 CGNL1Q0VF96 1302 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 ZNF587BE7ETH6 402 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 IFNL4K9M1U5 179 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 BUB3O43684 328 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 PAGE4O60829 102 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 AFPP02771 609 aaKnown RBP4.26□□□□□ -1.73
ITGB1-216ENST00000493758 F7P08709 466 aaPredicted RBP4.26□□□□□ -1.73
ITGB1-216ENST00000493758 HOXC9P31274 260 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 USP8P40818 1118 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 ZBTB17Q13105 803 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 SOWAHCQ53LP3 525 aaPredicted RBP4.26□□□□□ -1.73
ITGB1-216ENST00000493758 PAPPA-AS1Q5QFB9 102 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 MMS22LQ6ZRQ5 1243 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 CACNA2D4Q7Z3S7 1137 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 EXOC3L1Q86VI1 746 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 PSPC1Q8WXF1 523 aaKnown RBP4.26□□□□□ -1.73
ITGB1-216ENST00000493758 FIG4Q92562 907 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 C3orf30Q96M34 536 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 KXD1Q9BQD3 176 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 TMEM47Q9BQJ4 181 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 TMEM30AQ9NV96 361 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 HAO1Q9UJM8 370 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 RCOR1Q9UKL0 485 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 ICAM5Q9UMF0 924 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 VDAC3Q9Y277 283 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 SNX9Q9Y5X1 595 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 CAPN7Q9Y6W3 813 aa4.26□□□□□ -1.73
ITGB1-216ENST00000493758 A0A1W2PQF6 199 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 BMPR1BO00238 502 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 NPHP1O15259 732 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms