RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 ERLEC1Q96DZ1 483 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 C1QTNF7Q9BXJ2 289 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 SLC6A17Q9H1V8 727 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 ANKZF1Q9H8Y5 726 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 POLR3BQ9NW08 1133 aaPredicted RBP12.45□□□□□ -0.42
SNX17-208ENST00000493711 C2orf42Q9NWW7 574 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 PKP3Q9Y446 797 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 ZNF711Q9Y462 761 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 NUP205Q92621 2012 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 NPIPB15A6NHN6 443 aaPredicted RBP12.44□□□□□ -0.42
SNX17-208ENST00000493711 GOLGA8CPA6NN73 597 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 STX7O15400 261 aaKnown RBP12.44□□□□□ -0.42
SNX17-208ENST00000493711 PCDH8O95206 1070 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 POLBP06746 335 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 ALPIP09923 528 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 TSHRP16473 764 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 TPH1P17752 444 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 CTPS1P17812 591 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 PAMP19021 973 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 CNR2P34972 360 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 HADHAP40939 763 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 CARSP49589 748 aaKnown RBP12.44□□□□□ -0.42
SNX17-208ENST00000493711 CCR5P51681 352 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 METAP1P53582 386 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 ADPRHP54922 357 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 CSTF1Q05048 431 aaKnown RBP12.44□□□□□ -0.42
SNX17-208ENST00000493711 MSLNQ13421 630 aaPredicted RBP12.44□□□□□ -0.42
SNX17-208ENST00000493711 OLIG2Q13516 323 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 POU6F1Q14863 301 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 BBS9Q3SYG4 887 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 CCDC38Q502W7 563 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 CERCAMQ5T4B2 595 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 CASC4Q6P4E1 433 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 CCNI2Q6ZMN8 369 aaPredicted RBP12.44□□□□□ -0.42
SNX17-208ENST00000493711 TMC3Q7Z5M5 1100 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 TRIM69Q86WT6 500 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 RELL1Q8IUW5 271 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 NRSN1Q8IZ57 195 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 CBARPQ8N350 705 aaPredicted RBP12.44□□□□□ -0.42
SNX17-208ENST00000493711 CADM4Q8NFZ8 388 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 GABPB2Q8TAK5 448 aaPredicted RBP12.44□□□□□ -0.42
SNX17-208ENST00000493711 STAMBPL1Q96FJ0 436 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 EBNA1BP2Q99848 306 aaKnown RBP12.44□□□□□ -0.42
SNX17-208ENST00000493711 KIFC1Q9BW19 673 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 WSB2Q9NYS7 404 aaPredicted RBP12.44□□□□□ -0.42
SNX17-208ENST00000493711 PKD2L2Q9NZM6 624 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 SOX13Q9UN79 622 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 TCAF1Q9Y4C2 921 aa12.44□□□□□ -0.42
SNX17-208ENST00000493711 TBC1D3DA0A087WVF3 549 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 TBC1D3IA0A087WXS9 549 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 TBC1D3EA0A087X179 549 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 TBC1D3KA0A087X1G2 549 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 FAM237BA0A1B0GVD1 139 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 TBC1D3FA6NER0 549 aaPredicted RBP12.43□□□□□ -0.42
SNX17-208ENST00000493711 MROH6A6NGR9 719 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 TBC1D3LB9A6J9 549 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 PLK4O00444 970 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 NDUFS2O75306 463 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 AVILO75366 819 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 SPAG6O75602 509 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 SEMA4FO95754 770 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 PYGLP06737 847 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 GSTA2P09210 222 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 TBC1D3HP0C7X1 549 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 PGAM1P18669 254 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 PSMA3P25788 255 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 MGAT1P26572 445 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 LIG3P49916 1009 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 STC1P52823 247 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 TAS2R38P59533 333 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 PDIA2Q13087 525 aaKnown RBP12.43□□□□□ -0.42
SNX17-208ENST00000493711 SGCGQ13326 291 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 SEPT6Q14141 434 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 AGERQ15109 404 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 TRADDQ15628 312 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 CDKN3Q16667 212 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 MAP9Q49MG5 647 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 SPDYCQ5MJ68 293 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 FNBP1LQ5T0N5 605 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 LRRC66Q68CR7 880 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 TBC1D3GQ6DHY5 549 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 TBC1D3CQ6IPX1 549 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 LIPIQ6XZB0 460 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 THSD4Q6ZMP0 1018 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 ZNF765Q7L2R6 523 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 LYSMD3Q7Z3D4 306 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 CYP2U1Q7Z449 544 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 FAM124AQ86V42 546 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 NLRP8Q86W28 1048 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 HORMAD1Q86X24 394 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 TBC1D3Q8IZP1 549 aaPredicted RBP12.43□□□□□ -0.42
SNX17-208ENST00000493711 TTC30BQ8N4P2 665 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 MYRIPQ8NFW9 859 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 DTX3LQ8TDB6 740 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 PYROXD1Q8WU10 500 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 STYXQ8WUJ0 223 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 SIGLEC10Q96LC7 697 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 TTC25Q96NG3 672 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 PRRX2Q99811 253 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 HINFPQ9BQA5 517 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms