RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 LCTLQ6UWM7 567 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 TBC1D26Q86UD7 250 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 ZNF354CQ86Y25 554 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 KMT5CQ86Y97 462 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 IL17REQ8NFR9 667 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 ZNF354BQ96LW1 612 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 ZNF570Q96NI8 536 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 TWNKQ96RR1 684 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 PYM1Q9BRP8 204 aaKnown RBP4.07□□□□□ -1.76
SMC4-223ENST00000493695 DCTN5Q9BTE1 182 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 NUF2Q9BZD4 464 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 UPF2Q9HAU5 1272 aaKnown RBP4.07□□□□□ -1.76
SMC4-223ENST00000493695 TMEM160Q9NX00 188 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 MAP3K20Q9NYL2 800 aaKnown RBP4.07□□□□□ -1.76
SMC4-223ENST00000493695 PDP2Q9P2J9 529 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 RCOR1Q9UKL0 485 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 PADI1Q9ULC6 663 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 SUFUQ9UMX1 484 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 DERAQ9Y315 318 aa4.07□□□□□ -1.76
SMC4-223ENST00000493695 LRRFIP2Q9Y608 721 aaKnown RBP4.07□□□□□ -1.76
SMC4-223ENST00000493695 A0A1B0GVC2 190 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 HSPB2A8KAH6 182 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 AKR1B15C9JRZ8 316 aaPredicted RBP4.06□□□□□ -1.76
SMC4-223ENST00000493695 KLRF2D3W0D1 207 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 EIF3FO00303 357 aaPredicted RBP4.06□□□□□ -1.76
SMC4-223ENST00000493695 ANP32CO43423 234 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 ZNF500O60304 480 aaPredicted RBP4.06□□□□□ -1.76
SMC4-223ENST00000493695 ITGA2P17301 1181 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 CD58P19256 250 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 USP8P40818 1118 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 PAPOLAP51003 745 aaKnown RBP4.06□□□□□ -1.76
SMC4-223ENST00000493695 TERF1P54274 439 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 PPIGQ13427 754 aaKnown RBP eCLIP4.06□□□□□ -1.76
SMC4-223ENST00000493695 HSPB2Q16082 182 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 MMEL1Q495T6 779 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 HSP90AB4PQ58FF6 505 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 KCNT1Q5JUK3 1230 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 MAP3K21Q5TCX8 1036 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 SLC36A4Q6YBV0 504 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 ZNF852Q6ZMS4 543 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 MOB3CQ70IA8 216 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 LRRTM4Q86VH4 590 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 C2CD5Q86YS7 1000 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 LYG1Q8N1E2 194 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 TMEM57Q8N5G2 664 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 USP38Q8NB14 1042 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 AFG1LQ8WV93 481 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 TMEM170AQ8WVE7 144 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 MASTLQ96GX5 879 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 ZSCAN31Q96LW9 406 aaPredicted RBP4.06□□□□□ -1.76
SMC4-223ENST00000493695 TBATAQ96M53 351 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 ZNF599Q96NL3 588 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 UBXN6Q9BZV1 441 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 PLEKHA5Q9HAU0 1116 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 DNAJC16Q9Y2G8 782 aa4.06□□□□□ -1.76
SMC4-223ENST00000493695 IGKV6D-41A0A0C4DH26 115 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 ARHGAP10A1A4S6 786 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 CEP104O60308 925 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 CRLF1O75462 422 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 CAVIN2O95810 425 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 SLC2A4P14672 509 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 CCR5P51681 352 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 TLE2Q04725 743 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 CTXN3Q4LDR2 81 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 STXBP5Q5T5C0 1151 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 GTSCR1Q86UQ5 136 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 TMEM219Q86XT9 240 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 DUSP19Q8WTR2 217 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 TRIM63Q969Q1 353 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 EVI5LQ96CN4 794 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 LGALS12Q96DT0 336 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 LRRC1Q9BTT6 524 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 RIC8AQ9NPQ8 531 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 GTF2A1LQ9UNN4 478 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 AMDHD2Q9Y303 409 aa4.05□□□□□ -1.76
SMC4-223ENST00000493695 ADGRF5Q8IZF2 1346 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 G6PDP11413 515 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 CD53P19397 219 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 YWHAZP63104 245 aaKnown RBP4.04□□□□□ -1.76
SMC4-223ENST00000493695 CHRNDQ07001 517 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 CCDC96Q2M329 555 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 ZC2HC1BQ5TFG8 222 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 SLC35E4Q6ICL7 350 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 GFRALQ6UXV0 394 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 KIAA2013Q8IYS2 634 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 SPAG16Q8N0X2 631 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 SCCPDHQ8NBX0 429 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 HCAR2Q8TDS4 363 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 PYGO2Q9BRQ0 406 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 POLR3CQ9BUI4 534 aaPredicted RBP4.04□□□□□ -1.76
SMC4-223ENST00000493695 KLHL1Q9NR64 748 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 RRN3Q9NYV6 651 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 GGA3Q9NZ52 723 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 OGFRQ9NZT2 677 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 CD207Q9UJ71 328 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 A3GALT2U3KPV4 340 aa4.04□□□□□ -1.76
SMC4-223ENST00000493695 VWA3AA6NCI4 1184 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 STX16-NPEPL1H3BU86 382 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 STX16O14662 325 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 PCDH7O60245 1069 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms