RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 TMCO3Q6UWJ1 677 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 SPRED1Q7Z699 444 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 HEATR4Q86WZ0 1026 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 JAMLQ86YT9 394 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 SFTPA2Q8IWL1 248 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 PGBD5Q8N414 524 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 ATPAF2Q8N5M1 289 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 Q8N9G6 341 aaPredicted RBP9.13□□□□□ -0.95
NFIA-213ENST00000493627 CCL4L1Q8NHW4 92 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 PDCD6IPQ8WUM4 868 aaKnown RBP9.13□□□□□ -0.95
NFIA-213ENST00000493627 HSPH1Q92598 858 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 TTC9Q92623 222 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 WBP1Q96G27 269 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 COQ10AQ96MF6 247 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 CSPG4P5Q96PW8 444 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 MGME1Q9BQP7 344 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 LGR4Q9BXB1 951 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 DPEP2Q9H4A9 486 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 CARS2Q9HA77 564 aaKnown RBP9.13□□□□□ -0.95
NFIA-213ENST00000493627 CYP4F12Q9HCS2 524 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 MRPL47Q9HD33 250 aaKnown RBP9.13□□□□□ -0.95
NFIA-213ENST00000493627 ETNK2Q9NVF9 386 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.13□□□□□ -0.95
NFIA-213ENST00000493627 TMEM63CQ9P1W3 806 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 PISDQ9UG56 409 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 MOSPD1Q9UJG1 213 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 APPL1Q9UKG1 709 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 ATXN7L1Q9ULK2 861 aaPredicted RBP9.13□□□□□ -0.95
NFIA-213ENST00000493627 LOXL2Q9Y4K0 774 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 PCDHGA7Q9Y5G6 932 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 RNF215Q9Y6U7 377 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 ANKRD36A6QL64 1941 aa9.13□□□□□ -0.95
NFIA-213ENST00000493627 SHROOM3Q8TF72 1996 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 A0A1W2PQ67 120 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 SMTNL1A8MU46 457 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 PDE2AO00408 941 aaPredicted RBP9.12□□□□□ -0.95
NFIA-213ENST00000493627 ZIC2O95409 532 aaPredicted RBP9.12□□□□□ -0.95
NFIA-213ENST00000493627 JMJD7P0C870 316 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 SKILP12757 684 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 PNLIPP16233 465 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 LHCGRP22888 699 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 AMPD1P23109 780 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 NFKBIAP25963 317 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 SLC5A2P31639 672 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 SERPINB6P35237 376 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 MAXP61244 160 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 CDK3Q00526 305 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 TRAF2Q12933 501 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 ARHGEF7Q14155 803 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 MAP9Q49MG5 647 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 TDRD12Q587J7 1177 aaKnown RBP9.12□□□□□ -0.95
NFIA-213ENST00000493627 KIAA1614Q5VZ46 1190 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 DENND2CQ68D51 928 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 TXNRD3NBQ6F5E7 133 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 CCDC81Q6ZN84 652 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 POLNQ7Z5Q5 900 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 ZNF605Q86T29 641 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 BBS5Q8N3I7 341 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 KIAA1524Q8TCG1 905 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 DTD2Q96FN9 168 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 NUDCD1Q96RS6 583 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 CCNL2Q96S94 520 aaPredicted RBP9.12□□□□□ -0.95
NFIA-213ENST00000493627 SEMA4CQ9C0C4 833 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 ISCUQ9H1K1 167 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 SUDS3Q9H7L9 328 aaPredicted RBP9.12□□□□□ -0.95
NFIA-213ENST00000493627 NOD2Q9HC29 1040 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 PHPT1Q9NRX4 125 aaPredicted RBP9.12□□□□□ -0.95
NFIA-213ENST00000493627 LRIT1Q9P2V4 623 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 ACSL6Q9UKU0 697 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 PCDHGC4Q9Y5F7 938 aa9.12□□□□□ -0.95
NFIA-213ENST00000493627 GOLGA6CA6NDK9 693 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 GOLGA6BA6NDN3 693 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 NPIPB15A6NHN6 443 aaPredicted RBP9.11□□□□□ -0.95
NFIA-213ENST00000493627 PSMD11O00231 422 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 NUDT21O43809 227 aaKnown RBP9.11□□□□□ -0.95
NFIA-213ENST00000493627 MAFKO60675 156 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 PGLSO95336 258 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 GOLGA6DP0CG33 693 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 RARAP10276 462 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 CYP2A6P11509 494 aaPredicted RBP9.11□□□□□ -0.95
NFIA-213ENST00000493627 CCNB1P14635 433 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 ITIH1P19827 911 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 ETV3P41162 512 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 MMP13P45452 471 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 GNPDA1P46926 289 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 ZNF165P49910 485 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 CDH6P55285 790 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 MAZP56270 477 aaKnown RBP9.11□□□□□ -0.95
NFIA-213ENST00000493627 SLC25A11Q02978 314 aaKnown RBP9.11□□□□□ -0.95
NFIA-213ENST00000493627 ZFP36L1Q07352 338 aaKnown RBP9.11□□□□□ -0.95
NFIA-213ENST00000493627 ILF3Q12906 894 aaKnown RBP eCLIP9.11□□□□□ -0.95
NFIA-213ENST00000493627 LY6DQ14210 128 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 PIGHQ14442 188 aaPredicted RBP9.11□□□□□ -0.95
NFIA-213ENST00000493627 BOLA3Q53S33 107 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 FIGNQ5HY92 759 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 RALGPS1Q5JS13 557 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 RAET1GQ6H3X3 334 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 USP45Q70EL2 814 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 HSD11B1LQ7Z5J1 315 aa9.11□□□□□ -0.95
NFIA-213ENST00000493627 TSPAN33Q86UF1 283 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms