RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 FAM83FQ8NEG4 500 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 ETNPPLQ8TBG4 499 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 RCN3Q96D15 328 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 ZHX1-C8orf76Q96EF9 292 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 SGTBQ96EQ0 304 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 LENG8Q96PV6 779 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 GTPBP2Q9BX10 602 aaKnown RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 BCL2L14Q9BZR8 327 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 VRTNQ9H8Y1 702 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 SSU72Q9NP77 194 aaKnown RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 PRDM8Q9NQV8 689 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 NUFIP1Q9UHK0 495 aaKnown RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 TMPRSS11EQ9UL52 423 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 ERVK-19Q9WJR5 959 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 KDM3AQ9Y4C1 1321 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 CNTNAP1P78357 1384 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 PRSS51A0A1B0GVH4 220 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 SOCS2O14508 198 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 AP3D1O14617 1153 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 CALUO43852 315 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 ADAM11O75078 769 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 ATF7P17544 494 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 MAOBP27338 520 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 HTR3AP46098 478 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 KCNJ5P48544 419 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 RGS7P49802 495 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 GHRHRQ02643 423 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 GRSF1Q12849 480 aaKnown RBP eCLIP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 AQP6Q13520 282 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 CLCA4Q14CN2 919 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 STXBP2Q15833 593 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 CYP1B1Q16678 543 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 IMPG1Q17R60 797 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 ZIK1Q3SY52 487 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 Q5BKY6 102 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 MPP7Q5T2T1 576 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 LGSNQ5TDP6 509 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 TMEM65Q6PI78 240 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 BEND4Q6ZU67 534 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 BEST2Q8NFU1 509 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 OR7D4Q8NG98 312 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 ZNF564Q8TBZ8 553 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 SLC2A14Q8TDB8 520 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 TBC1D20Q96BZ9 403 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 TUBGCP3Q96CW5 907 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 RTKNQ9BST9 563 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 NUSAP1Q9BXS6 441 aaKnown RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 LRRC40Q9H9A6 602 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 ZNF556Q9HAH1 456 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 CYP4F12Q9HCS2 524 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 CHMP1AQ9HD42 196 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 ACOXLQ9NUZ1 547 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 MLXQ9UH92 298 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 CYTH4Q9UIA0 394 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 PCDHA2Q9Y5H9 948 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 COL4A4P53420 1690 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 NCANO14594 1321 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 A0A0B4J269 797 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 USP17L3A6NCW0 530 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 USP17L4A6NCW7 530 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 SGK1O00141 431 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 DFFAO00273 331 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 STX7O15400 261 aaKnown RBP6.86□□□□□ -1.31
VPS13B-205ENST00000493587 MED26O95402 600 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 ALBP02768 609 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CYP3A5P20815 502 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 MAPK4P31152 587 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CSKP41240 450 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CAPZA1P52907 286 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 RPL10AP62906 217 aaKnown RBP6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CREB5Q02930 508 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 KLF10Q13118 480 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CALCRLQ16602 461 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 HIST2H2ACQ16777 129 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CATSPEREQ5SY80 951 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 KRT79Q5XKE5 535 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 DENND5AQ6IQ26 1287 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CHSY3Q70JA7 882 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 USP17L1Q7RTZ2 530 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 WDR49Q8IV35 697 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 TRIM48Q8IWZ4 208 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 ARRDC4Q8NCT1 418 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 OR6Q1Q8NGQ2 317 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 MAGEE2Q8TD90 523 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-205ENST00000493587 LARP4BQ92615 738 aaKnown RBP6.86□□□□□ -1.31
VPS13B-205ENST00000493587 TFAP2CQ92754 450 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 SERAC1Q96JX3 654 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 PCDHAC1Q9H158 963 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 DEFB129Q9H1M3 183 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 C2orf40Q9H1Z8 148 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 DSN1Q9H410 356 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CYP3A43Q9HB55 503 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 SNX15Q9NRS6 342 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 USTQ9Y2C2 406 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 TCAF1Q9Y4C2 921 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CLUHO75153 1309 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 A0A0G2JPF8 293 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 HNRNPCL3B7ZW38 293 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 AKR7A2O43488 359 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms