RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 STON2Q8WXE9 905 aa10.09□□□□□ -0.79
PRPF3-206ENST00000493553 IGSF8Q969P0 613 aa10.09□□□□□ -0.79
PRPF3-206ENST00000493553 CCDC126Q96EE4 140 aa10.09□□□□□ -0.79
PRPF3-206ENST00000493553 FCRL3Q96P31 734 aaPredicted RBP10.09□□□□□ -0.79
PRPF3-206ENST00000493553 CINPQ9BW66 212 aaPredicted RBP10.09□□□□□ -0.79
PRPF3-206ENST00000493553 ADGRE3Q9BY15 652 aa10.09□□□□□ -0.79
PRPF3-206ENST00000493553 MTIF3Q9H2K0 278 aaKnown RBP10.09□□□□□ -0.79
PRPF3-206ENST00000493553 C7orf69Q9H7B7 122 aa10.09□□□□□ -0.79
PRPF3-206ENST00000493553 CYP4F12Q9HCS2 524 aa10.09□□□□□ -0.79
PRPF3-206ENST00000493553 SNX15Q9NRS6 342 aa10.09□□□□□ -0.79
PRPF3-206ENST00000493553 TREX1Q9NSU2 369 aa10.09□□□□□ -0.79
PRPF3-206ENST00000493553 HACD3Q9P035 362 aa10.09□□□□□ -0.79
PRPF3-206ENST00000493553 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.09□□□□□ -0.79
PRPF3-206ENST00000493553 DPP7Q9UHL4 492 aa10.09□□□□□ -0.79
PRPF3-206ENST00000493553 ACOT9Q9Y305 439 aa10.09□□□□□ -0.79
PRPF3-206ENST00000493553 INSL6Q9Y581 213 aa10.09□□□□□ -0.79
PRPF3-206ENST00000493553 INSL5Q9Y5Q6 135 aa10.09□□□□□ -0.79
PRPF3-206ENST00000493553 NR2E3Q9Y5X4 410 aa10.09□□□□□ -0.79
PRPF3-206ENST00000493553 CAPN7Q9Y6W3 813 aa10.09□□□□□ -0.79
PRPF3-206ENST00000493553 HMX2A2RU54 273 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 SLCO1B7G3V0H7 640 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 TRAFD1O14545 582 aaPredicted RBP10.08□□□□□ -0.8
PRPF3-206ENST00000493553 SNNO75324 88 aaPredicted RBP10.08□□□□□ -0.8
PRPF3-206ENST00000493553 STC2O76061 302 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 VAPBO95292 243 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 SEC24AO95486 1093 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 LRG1P02750 347 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 CTSAP10619 480 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 MBL2P11226 248 aaPredicted RBP10.08□□□□□ -0.8
PRPF3-206ENST00000493553 CPA3P15088 417 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 STMN1P16949 149 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 TPH1P17752 444 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 DDX6P26196 483 aaKnown RBP eCLIP10.08□□□□□ -0.8
PRPF3-206ENST00000493553 CORO1AP31146 461 aaKnown RBP10.08□□□□□ -0.8
PRPF3-206ENST00000493553 CD86P42081 329 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 KCNQ1P51787 676 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 MNAT1P51948 309 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 NAA20P61599 178 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 SLC20A2Q08357 652 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 SLC10A7Q0GE19 358 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 SEPT6Q14141 434 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 POU6F1Q14863 301 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 FAM133BQ5BKY9 247 aaKnown RBP10.08□□□□□ -0.8
PRPF3-206ENST00000493553 N4BP2L1Q5TBK1 243 aaPredicted RBP10.08□□□□□ -0.8
PRPF3-206ENST00000493553 IL31Q6EBC2 164 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 NADSYN1Q6IA69 706 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 KLC3Q6P597 504 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 ARHGAP36Q6ZRI8 547 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 MFN1Q8IWA4 741 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 HOMEZQ8IX15 550 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 C10orf67Q8IYJ2 551 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 NETO2Q8NC67 525 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 C2CD4AQ8NCU7 369 aaPredicted RBP10.08□□□□□ -0.8
PRPF3-206ENST00000493553 INPP5DQ92835 1189 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 MFSD3Q96ES6 412 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 APOL2Q9BQE5 337 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 FAM83CQ9BQN1 747 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 MGME1Q9BQP7 344 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 MCMBPQ9BTE3 642 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 VN1R3Q9BXE9 311 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 MFSD1Q9H3U5 465 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 IARS2Q9NSE4 1012 aaKnown RBP10.08□□□□□ -0.8
PRPF3-206ENST00000493553 UBP1Q9NZI7 540 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 FBXO5Q9UKT4 447 aa10.08□□□□□ -0.8
PRPF3-206ENST00000493553 RPL26L1Q9UNX3 145 aaKnown RBP10.08□□□□□ -0.8
PRPF3-206ENST00000493553 APOBEC2Q9Y235 224 aaKnown RBP10.08□□□□□ -0.8
PRPF3-206ENST00000493553 MRPL42Q9Y6G3 142 aaKnown RBP10.08□□□□□ -0.8
PRPF3-206ENST00000493553 VWA8A3KMH1 1905 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 TET1Q8NFU7 2136 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 A0A096LPK6 155 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 WDR91A4D1P6 747 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 MROH6A6NGR9 719 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 J3KR12 359 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 ADAM12O43184 909 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 UGT1A9O60656 530 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 PIAS1O75925 651 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 UNC5CO95185 931 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 OLFM2O95897 454 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 MT-CYBP00156 380 aaPredicted RBP10.07□□□□□ -0.8
PRPF3-206ENST00000493553 FGBP02675 491 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 RPL17P18621 184 aaKnown RBP10.07□□□□□ -0.8
PRPF3-206ENST00000493553 BGNP21810 368 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 NMBRP28336 390 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 MAPK1P28482 360 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 LEPRP48357 1165 aaKnown RBP10.07□□□□□ -0.8
PRPF3-206ENST00000493553 ARCN1P48444 511 aaKnown RBP10.07□□□□□ -0.8
PRPF3-206ENST00000493553 RAB10P61026 200 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 RPL26P61254 145 aaKnown RBP10.07□□□□□ -0.8
PRPF3-206ENST00000493553 PRAMEP78395 509 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 HTRA4P83105 476 aaPredicted RBP10.07□□□□□ -0.8
PRPF3-206ENST00000493553 SMAD3P84022 425 aaKnown RBP10.07□□□□□ -0.8
PRPF3-206ENST00000493553 OCRLQ01968 901 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 PPARDQ03181 441 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 ACVR1Q04771 509 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 UBE3AQ05086 875 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 TWF1Q12792 350 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 GRM2Q14416 872 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 USP10Q14694 798 aaKnown RBP10.07□□□□□ -0.8
PRPF3-206ENST00000493553 CHI3L2Q15782 390 aa10.07□□□□□ -0.8
PRPF3-206ENST00000493553 FAM83EQ2M2I3 478 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms