RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 NPIPB15A6NHN6 443 aaPredicted RBP11.62□□□□□ -0.55
CTSA-209ENST00000493522 C10orf142B7Z368 130 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 ZNF185O15231 689 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 LZTS3O60299 673 aaPredicted RBP11.62□□□□□ -0.55
CTSA-209ENST00000493522 FZD6O60353 706 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 CBFA2T3O75081 653 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 TM7SF2O76062 418 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 IFNB1P01574 187 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 ALPIP09923 528 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 C6P13671 934 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 AKT2P31751 481 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 VIPR1P32241 457 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 GRIA4P48058 902 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 GEMP55040 296 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 RPL26P61254 145 aaKnown RBP11.62□□□□□ -0.55
CTSA-209ENST00000493522 SGCGQ13326 291 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 ARHGEF7Q14155 803 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 PRPSAP1Q14558 356 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 OASLQ15646 514 aaKnown RBP11.62□□□□□ -0.55
CTSA-209ENST00000493522 CCNG2Q16589 344 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 ZNF284Q2VY69 593 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 DENND2CQ68D51 928 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 LAYNQ6UX15 382 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 KDELC2Q7Z4H8 507 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 TAB3Q8N5C8 712 aaPredicted RBP11.62□□□□□ -0.55
CTSA-209ENST00000493522 CCDC89Q8N998 374 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 PIH1D2Q8WWB5 315 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 SPOCK2Q92563 424 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 OXNAD1Q96HP4 312 aaPredicted RBP11.62□□□□□ -0.55
CTSA-209ENST00000493522 CAPZA3Q96KX2 299 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 SMIM14Q96QK8 99 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 ORAI3Q9BRQ5 295 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 C1QTNF7Q9BXJ2 289 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 FSD1LQ9BXM9 530 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 ADGRE3Q9BY15 652 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 SLC17A9Q9BYT1 436 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 EBF2Q9HAK2 575 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 USP29Q9HBJ7 922 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 TM9SF3Q9HD45 589 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 TM7SF3Q9NS93 570 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 FAM153AQ9UHL3 310 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 RPL26L1Q9UNX3 145 aaKnown RBP11.62□□□□□ -0.55
CTSA-209ENST00000493522 CA5BQ9Y2D0 317 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 COQ6Q9Y2Z9 468 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 IGSF10Q6WRI0 2623 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 PLXNB3Q9ULL4 1909 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 A0A0J9YYE9 177 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 GOLGA6L10A0A0M3HER8 536 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 C5orf60A6NFR6 353 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 PRAMEF26H0Y7S4 382 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 CES2O00748 559 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 FLRT2O43155 660 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 ANXA9O76027 345 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 NDST3O95803 873 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 TRBC1P01850 177 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 SLC4A1P02730 911 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 ITGAVP06756 1048 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 HNRNPA2B1P22626 353 aaKnown RBP11.61□□□□□ -0.55
CTSA-209ENST00000493522 ACTN2P35609 894 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 LIG3P49916 1009 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 AFF3P51826 1226 aaKnown RBP11.61□□□□□ -0.55
CTSA-209ENST00000493522 WNT3AP56704 352 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 RACK1P63244 317 aaKnown RBP11.61□□□□□ -0.55
CTSA-209ENST00000493522 CDK18Q07002 472 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 MPP3Q13368 585 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 FGL2Q14314 439 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 ACOX1Q15067 660 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 TEAD4Q15561 434 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 CNGA3Q16281 694 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 QPCTQ16769 361 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 P3H1Q32P28 736 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 HS1BP3Q53T59 392 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 FAXCQ5TGI0 409 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 CCDC70Q6NSX1 233 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 C19orf48Q6RUI8 117 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 KDELC1Q6UW63 502 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 TSPAN33Q86UF1 283 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 PRELID2Q8N945 189 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 TADA1Q96BN2 335 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 C16orf45Q96MC5 204 aaPredicted RBP11.61□□□□□ -0.55
CTSA-209ENST00000493522 PPP1R2P1Q96PQ5 205 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 MCCC1Q96RQ3 725 aaPredicted RBP11.61□□□□□ -0.55
CTSA-209ENST00000493522 TRIB3Q96RU7 358 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 CDC6Q99741 560 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 MLPHQ9BV36 600 aaPredicted RBP11.61□□□□□ -0.55
CTSA-209ENST00000493522 FICDQ9BVA6 458 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 AP1M1Q9BXS5 423 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 HOMER3Q9NSC5 361 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 PCDHGB2Q9Y5G2 931 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 SAR1BQ9Y6B6 198 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 APC2O95996 2303 aa11.61□□□□□ -0.55
CTSA-209ENST00000493522 ZFC3H1O60293 1989 aaKnown RBP11.61□□□□□ -0.55
CTSA-209ENST00000493522 GOLGA6CA6NDK9 693 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 GOLGA6BA6NDN3 693 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 GOLGA8CPA6NN73 597 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 FANCGO15287 622 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 GCATO75600 419 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 HEXIM1O94992 359 aaKnown RBP11.6□□□□□ -0.55
CTSA-209ENST00000493522 PAK4O96013 591 aaPredicted RBP11.6□□□□□ -0.55
CTSA-209ENST00000493522 PRLP01236 227 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms