RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SLC8A1P32418 973 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 ABL2P42684 1182 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 STC1P52823 247 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 EPHB1P54762 984 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 NCALDP61601 193 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 ASPHQ12797 758 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 DLG1Q12959 904 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 ZNF460Q14592 562 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 PITRM1Q5JRX3 1037 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 LIPMQ5VYY2 423 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 KLC3Q6P597 504 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 SPRED2Q7Z698 418 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 LDB1Q86U70 411 aaPredicted RBP14.05□□□□□ -0.16
PTPN7-216ENST00000492977 TMEM25Q86YD3 366 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 TTC30BQ8N4P2 665 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 ISG20Q96AZ6 181 aaKnown RBP14.05□□□□□ -0.16
PTPN7-216ENST00000492977 SKA1Q96BD8 255 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 OTUB2Q96DC9 234 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 UBXN10Q96LJ8 280 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 SORT1Q99523 831 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 C19orf43Q9BQ61 176 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 TUBB6Q9BUF5 446 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 GPAMQ9HCL2 828 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 SAR1AQ9NR31 198 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 IGSF5Q9NSI5 407 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 CPSF2Q9P2I0 782 aaKnown RBP14.05□□□□□ -0.16
PTPN7-216ENST00000492977 VPS9D1Q9Y2B5 631 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 DNAJC16Q9Y2G8 782 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 PCDHB9Q9Y5E1 797 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 MKI67P46013 3256 aaKnown RBP14.05□□□□□ -0.16
PTPN7-216ENST00000492977 H7C0S8 307 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 TK2O00142 265 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 HGSO14964 777 aaPredicted RBP14.05□□□□□ -0.16
PTPN7-216ENST00000492977 PFDN6O15212 129 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 STX7O15400 261 aaKnown RBP14.05□□□□□ -0.16
PTPN7-216ENST00000492977 SOCS5O75159 536 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 LYPLA1O75608 230 aaPredicted RBP14.05□□□□□ -0.16
PTPN7-216ENST00000492977 UNC5CO95185 931 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 WISP3O95389 354 aaPredicted RBP14.05□□□□□ -0.16
PTPN7-216ENST00000492977 IGSF6O95976 241 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 RBP1P09455 135 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 KITP10721 976 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 GLRBP48167 497 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 PGGT1BP53609 377 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 ZBTB16Q05516 673 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 BCL2L1Q07817 233 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 ZNF77Q15935 545 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 GRASPQ7Z6J2 395 aaPredicted RBP14.05□□□□□ -0.16
PTPN7-216ENST00000492977 CLNKQ7Z7G1 428 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 RIN3Q8TB24 985 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 HEXDCQ8WVB3 486 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 PIH1D2Q8WWB5 315 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 IRF7Q92985 503 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 MYO19Q96H55 970 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 DCBLD2Q96PD2 775 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 TM6SF2Q9BZW4 377 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 POPDC3Q9HBV1 291 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 HS3ST2Q9Y278 367 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 CRYL1Q9Y2S2 319 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 TRAFD1O14545 582 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-216ENST00000492977 SLC9A3R1O14745 358 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-216ENST00000492977 ZNF821O75541 412 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-216ENST00000492977 CA3P07451 260 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 CCDC166P0CW27 439 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 FDXRP22570 491 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 SERPINB3P29508 390 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 HLA-FP30511 346 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 SUOXP51687 545 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 AQP5P55064 265 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 CDKN2DP55273 166 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 ERVK-21P61565 698 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 SNRPD1P62314 119 aaKnown RBP14.04□□□□□ -0.16
PTPN7-216ENST00000492977 NTHL1P78549 312 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 SULT2A1Q06520 285 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 USP4Q13107 963 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 GPM6BQ13491 265 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 CSHL1Q14406 222 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 SEMA3AQ14563 771 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 DMC1Q14565 340 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 ACAP2Q15057 778 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 HSF5Q4G112 596 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-216ENST00000492977 FAM91A1Q658Y4 838 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 ZNF549Q6P9A3 640 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 NAPRTQ6XQN6 538 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 CAMK1DQ8IU85 385 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 EFHBQ8N7U6 833 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 KIAA1958Q8N8K9 716 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 OR2AP1Q8NGE2 309 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 GATA5Q9BWX5 397 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-216ENST00000492977 BBS2Q9BXC9 721 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 ATP13A3Q9H7F0 1226 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 SPHK2Q9NRA0 654 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 XPR1Q9UBH6 696 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 EVLQ9UI08 416 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-216ENST00000492977 PKP3Q9Y446 797 aa14.04□□□□□ -0.16
PTPN7-216ENST00000492977 NEDD8-MDP1E9PL57 170 aa14.03□□□□□ -0.16
PTPN7-216ENST00000492977 PER2O15055 1255 aa14.03□□□□□ -0.16
PTPN7-216ENST00000492977 DLX3O60479 287 aa14.03□□□□□ -0.16
PTPN7-216ENST00000492977 HNRNPCL1O60812 293 aaKnown RBP14.03□□□□□ -0.16
PTPN7-216ENST00000492977 NDUFS3O75489 264 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms