RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 TAF3Q5VWG9 929 aa11.75□□□□□ -0.53
CACNA1C-228ENST00000492150 SPATA3Q8NHX4 192 aa11.75□□□□□ -0.53
CACNA1C-228ENST00000492150 OR1E3Q8WZA6 343 aa11.75□□□□□ -0.53
CACNA1C-228ENST00000492150 WDR92Q96MX6 357 aa11.75□□□□□ -0.53
CACNA1C-228ENST00000492150 PDCL3Q9H2J4 239 aa11.75□□□□□ -0.53
CACNA1C-228ENST00000492150 SEMA6CQ9H3T2 930 aa11.75□□□□□ -0.53
CACNA1C-228ENST00000492150 DGKBQ9Y6T7 804 aa11.75□□□□□ -0.53
CACNA1C-228ENST00000492150 TSPAN11A1L157 253 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 TMEM202A6NGA9 273 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 ZSCAN5CA6NGD5 496 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 PIGNO95427 931 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 CBX6O95503 412 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 C8BP07358 591 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 PLEKP08567 350 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 CCL4P13236 92 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 MAP4P27816 1152 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 SUOXP51687 545 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 PMS2P54278 862 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 RHOAP61586 193 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 B4GALNT1Q00973 533 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 ELP6Q0PNE2 266 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 HLTFQ14527 1009 aaKnown RBP eCLIP11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 AGERQ15109 404 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 ZRSR2Q15696 482 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 CDO1Q16878 200 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 CCDC14Q49A88 953 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 NADK2Q4G0N4 442 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 C14orf28Q4W4Y0 310 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 INO80DQ53TQ3 878 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 TAF8Q7Z7C8 310 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 PLA2G15Q8NCC3 412 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 FAM46DQ8NEK8 389 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 HCAR2Q8TDS4 363 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 CASKIN2Q8WXE0 1202 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 CPA5Q8WXQ8 436 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 FUBP1Q96AE4 644 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 HDAC11Q96DB2 347 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 TBC1D31Q96DN5 1066 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 HMCESQ96FZ2 354 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 PCDH12Q9NPG4 1184 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 METTL5Q9NRN9 209 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 LRIT1Q9P2V4 623 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 LHX3Q9UBR4 397 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 RWDD2AQ9UIY3 292 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 TLK1Q9UKI8 766 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 PILRAQ9UKJ1 303 aa11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 ZNF469Q96JG9 3925 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-228ENST00000492150 B4GAT1O43505 415 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 LSM8O95777 96 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 PCCBP05166 539 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 FGF3P11487 239 aaPredicted RBP11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 XPAP23025 273 aaPredicted RBP11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 LIG3P49916 1009 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 NOMO3P69849 1222 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 ABHD18Q0P651 414 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 MTM1Q13496 603 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 ARHGEF7Q14155 803 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 CYTH1Q15438 398 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 UGP2Q16851 508 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 PRR30Q53SZ7 412 aaPredicted RBP11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 PHF19Q5T6S3 580 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 NOP9Q86U38 636 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 ZSWIM9Q86XI8 627 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 NLGN4XQ8N0W4 816 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 CCDC185Q8N715 623 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 NLGN4YQ8NFZ3 816 aaPredicted RBP11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 ATL2Q8NHH9 583 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 RXFP2Q8WXD0 754 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 PMEPA1Q969W9 287 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 ASPSCR1Q9BZE9 553 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 TMEM168Q9H0V1 697 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 SUV39H2Q9H5I1 410 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 FGF22Q9HCT0 170 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 MRPL40Q9NQ50 206 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 B3GALT1Q9Y5Z6 326 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 FHOD1Q9Y613 1164 aa11.73□□□□□ -0.53
CACNA1C-228ENST00000492150 LOC101059948A0A1B0GTJ6 334 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 C2CD4BA6NLJ0 364 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 B4DGG1 531 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 PRSS44E7EML9 344 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 NUDT21O43809 227 aaKnown RBP11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 BUB1BO60566 1050 aaPredicted RBP11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 NADKO95544 446 aaPredicted RBP11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 MMEP08473 750 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 CAPN3P20807 821 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 MMP12P39900 470 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 MTIF2P46199 727 aaKnown RBP11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 PER3P56645 1201 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 KIAA1024LP59773 190 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 RAPGEF1Q13905 1077 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 NAA35Q5VZE5 725 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 SPECC1LQ69YQ0 1117 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 PHLDB2Q86SQ0 1253 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 ZNF354CQ86Y25 554 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 APLFQ8IW19 511 aaPredicted RBP11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 PYROXD2Q8N2H3 581 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 CCDC112Q8NEF3 446 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 OR56A4Q8NGH8 313 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 CCL4L1Q8NHW4 92 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 JOSD2Q8TAC2 188 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms