RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 C11orf63Q6NUN7 778 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 PNCKQ6P2M8 343 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 MFSD7Q6UXD7 560 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 HSD11B1LQ7Z5J1 315 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 TSPAN33Q86UF1 283 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 GKN2Q86XP6 184 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 OR56A4Q8NGH8 313 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 ARRDC2Q8TBH0 407 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 IFI44Q8TCB0 444 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 SCG3Q8WXD2 468 aaKnown RBP15.1■□□□□ 0.01
USP39-217ENST00000491659 NXPE2Q96DL1 559 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 PDXPQ96GD0 296 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 OLFM3Q96PB7 478 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 BOCQ9BWV1 1114 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 BRD8Q9H0E9 1235 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 PCDH9Q9HC56 1237 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 PHPT1Q9NRX4 125 aaPredicted RBP15.1■□□□□ 0.01
USP39-217ENST00000491659 GOLGA6AQ9NYA3 693 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 SEPT10Q9P0V9 454 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 CLCA2Q9UQC9 943 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.1■□□□□ 0.01
USP39-217ENST00000491659 ALG6Q9Y672 507 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 U3KQA8 63 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 TRABD2BA6NFA1 517 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 SOWAHDA6NJG2 315 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 NDUFA10O95299 355 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 MYCLP1P12525 358 aaPredicted RBP15.09■□□□□ 0.01
USP39-217ENST00000491659 TRIM23P36406 574 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 ETV3P41162 512 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 CD86P42081 329 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 RPL26P61254 145 aaKnown RBP15.09■□□□□ 0.01
USP39-217ENST00000491659 ZBTB17Q13105 803 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 TARDBPQ13148 414 aaKnown RBP eCLIP15.09■□□□□ 0.01
USP39-217ENST00000491659 CAMK2BQ13554 666 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 TCEA2Q15560 299 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 CDKN3Q16667 212 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 RAET1GQ6H3X3 334 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 NPNTQ6UXI9 565 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 BZW1Q7L1Q6 419 aaKnown RBP15.09■□□□□ 0.01
USP39-217ENST00000491659 EFL1Q7Z2Z2 1120 aaKnown RBP15.09■□□□□ 0.01
USP39-217ENST00000491659 PROSER1Q86XN7 944 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 CCDC50Q8IVM0 306 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 SDR16C5Q8N3Y7 309 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 LPCAT1Q8NF37 534 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 MDM1Q8TC05 714 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 CALR3Q96L12 384 aaKnown RBP15.09■□□□□ 0.01
USP39-217ENST00000491659 CLPBQ9H078 707 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 ABCG4Q9H172 646 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 GOLPH3Q9H4A6 298 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 MOSPD1Q9UJG1 213 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 RPL26L1Q9UNX3 145 aaKnown RBP15.09■□□□□ 0.01
USP39-217ENST00000491659 TFR2Q9UP52 801 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 CHKBQ9Y259 395 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 EPN1Q9Y6I3 576 aaPredicted RBP15.09■□□□□ 0.01
USP39-217ENST00000491659 DGKBQ9Y6T7 804 aa15.09■□□□□ 0.01
USP39-217ENST00000491659 GOLGA4Q13439 2230 aaKnown RBP15.09■□□□□ 0.01
USP39-217ENST00000491659 CPED1A4D0V7 1026 aa15.08■□□□□ 0
USP39-217ENST00000491659 CAPN8A6NHC0 703 aa15.08■□□□□ 0
USP39-217ENST00000491659 TNFRSF10CO14798 259 aa15.08■□□□□ 0
USP39-217ENST00000491659 YY2O15391 372 aa15.08■□□□□ 0
USP39-217ENST00000491659 OPA1O60313 960 aa15.08■□□□□ 0
USP39-217ENST00000491659 KRT37O76014 449 aa15.08■□□□□ 0
USP39-217ENST00000491659 CELA2BP08218 269 aaPredicted RBP15.08■□□□□ 0
USP39-217ENST00000491659 TGM2P21980 687 aa15.08■□□□□ 0
USP39-217ENST00000491659 FECHP22830 423 aa15.08■□□□□ 0
USP39-217ENST00000491659 CDKN2BP42772 138 aa15.08■□□□□ 0
USP39-217ENST00000491659 NR2C2P49116 596 aa15.08■□□□□ 0
USP39-217ENST00000491659 NIPAL4Q0D2K0 466 aa15.08■□□□□ 0
USP39-217ENST00000491659 GUSBP11Q6P575 273 aa15.08■□□□□ 0
USP39-217ENST00000491659 LVRNQ6Q4G3 990 aa15.08■□□□□ 0
USP39-217ENST00000491659 SPOCD1Q6ZMY3 1216 aa15.08■□□□□ 0
USP39-217ENST00000491659 Q6ZVL8 140 aa15.08■□□□□ 0
USP39-217ENST00000491659 DAAM2Q86T65 1068 aa15.08■□□□□ 0
USP39-217ENST00000491659 HEATR4Q86WZ0 1026 aa15.08■□□□□ 0
USP39-217ENST00000491659 GAS2L3Q86XJ1 694 aa15.08■□□□□ 0
USP39-217ENST00000491659 KATNAL2Q8IYT4 538 aa15.08■□□□□ 0
USP39-217ENST00000491659 CACTIN-AS1Q8N1I8 211 aa15.08■□□□□ 0
USP39-217ENST00000491659 MAPK15Q8TD08 544 aa15.08■□□□□ 0
USP39-217ENST00000491659 OR1E3Q8WZA6 343 aa15.08■□□□□ 0
USP39-217ENST00000491659 NAT6Q93015 286 aa15.08■□□□□ 0
USP39-217ENST00000491659 RBM41Q96IZ5 413 aaKnown RBP15.08■□□□□ 0
USP39-217ENST00000491659 DEPDC7Q96QD5 511 aa15.08■□□□□ 0
USP39-217ENST00000491659 RBM15Q96T37 977 aaKnown RBP eCLIP15.08■□□□□ 0
USP39-217ENST00000491659 CEP41Q9BYV8 373 aa15.08■□□□□ 0
USP39-217ENST00000491659 FGF22Q9HCT0 170 aa15.08■□□□□ 0
USP39-217ENST00000491659 DKK4Q9UBT3 224 aa15.08■□□□□ 0
USP39-217ENST00000491659 SPEGQ15772 3267 aa15.08■□□□□ 0
USP39-217ENST00000491659 EME2A4GXA9 379 aaPredicted RBP15.07■□□□□ 0
USP39-217ENST00000491659 TMEM202A6NGA9 273 aa15.07■□□□□ 0
USP39-217ENST00000491659 SRRM3A6NNA2 597 aaPredicted RBP15.07■□□□□ 0
USP39-217ENST00000491659 CST8O60676 142 aa15.07■□□□□ 0
USP39-217ENST00000491659 MT-CO3P00414 261 aa15.07■□□□□ 0
USP39-217ENST00000491659 CAPNS1P04632 268 aa15.07■□□□□ 0
USP39-217ENST00000491659 PYGLP06737 847 aa15.07■□□□□ 0
USP39-217ENST00000491659 TEAD1P28347 426 aa15.07■□□□□ 0
USP39-217ENST00000491659 GPR1P46091 355 aa15.07■□□□□ 0
USP39-217ENST00000491659 NAP1L1P55209 391 aaKnown RBP15.07■□□□□ 0
USP39-217ENST00000491659 CDK3Q00526 305 aa15.07■□□□□ 0
USP39-217ENST00000491659 IHHQ14623 411 aa15.07■□□□□ 0
USP39-217ENST00000491659 PTPRRQ15256 657 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms