RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 DTD2Q96FN9 168 aa15.4■□□□□ 0.06
VPS26A-207ENST00000490696 LYSMD1Q96S90 227 aa15.4■□□□□ 0.06
VPS26A-207ENST00000490696 VAT1Q99536 393 aa15.4■□□□□ 0.06
VPS26A-207ENST00000490696 APOOQ9BUR5 198 aa15.4■□□□□ 0.06
VPS26A-207ENST00000490696 C10orf88Q9H8K7 445 aa15.4■□□□□ 0.06
VPS26A-207ENST00000490696 LZTFL1Q9NQ48 299 aa15.4■□□□□ 0.06
VPS26A-207ENST00000490696 UCKL1Q9NWZ5 548 aa15.4■□□□□ 0.06
VPS26A-207ENST00000490696 DNAJC28Q9NX36 388 aa15.4■□□□□ 0.06
VPS26A-207ENST00000490696 PNMA8BQ9ULN7 279 aaPredicted RBP15.4■□□□□ 0.06
VPS26A-207ENST00000490696 GOLGA8CPA6NN73 597 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 ANKRD66B4E2M5 251 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 H7C0C1 242 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 MT-CYBP00156 380 aaPredicted RBP15.39■□□□□ 0.05
VPS26A-207ENST00000490696 ZNF30P17039 623 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 RBL1P28749 1068 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 PMLP29590 882 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 TRIM23P36406 574 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 ETV3P41162 512 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 ATP5OP48047 213 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 PTSQ03393 145 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 KLF1Q13351 362 aaPredicted RBP15.39■□□□□ 0.05
VPS26A-207ENST00000490696 ARHGEF7Q14155 803 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 CDKN3Q16667 212 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 DENND2CQ68D51 928 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 ESRP1Q6NXG1 681 aaKnown RBP15.39■□□□□ 0.05
VPS26A-207ENST00000490696 Q6ZVL8 140 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 TECPR1Q7Z6L1 1165 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 NUS1Q96E22 293 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 FAM118BQ9BPY3 351 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 ADGRE3Q9BY15 652 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 TOR4AQ9NXH8 423 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 KCTD5Q9NXV2 234 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 KLHL8Q9P2G9 620 aaPredicted RBP15.39■□□□□ 0.05
VPS26A-207ENST00000490696 PPP2R2CQ9Y2T4 447 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 OR1A2Q9Y585 309 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 CHD6Q8TD26 2715 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 USP24Q9UPU5 2620 aa15.39■□□□□ 0.05
VPS26A-207ENST00000490696 CHD8Q9HCK8 2581 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 COL5A1P20908 1838 aaPredicted RBP15.38■□□□□ 0.05
VPS26A-207ENST00000490696 K7ESM1 405 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 RBP3P10745 1247 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 JUNDP17535 347 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 NFKB1P19838 968 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 STC1P52823 247 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 EIF3EP60228 445 aaKnown RBP15.38■□□□□ 0.05
VPS26A-207ENST00000490696 HNRNPKP61978 463 aaKnown RBP eCLIP15.38■□□□□ 0.05
VPS26A-207ENST00000490696 CDK18Q07002 472 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 GALNT3Q14435 633 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 NFATC4Q14934 902 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 PNCKQ6P2M8 343 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 RFLNAQ6ZTI6 216 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 PID1Q7Z2X4 250 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 CDKL3Q8IVW4 592 aaPredicted RBP15.38■□□□□ 0.05
VPS26A-207ENST00000490696 EID2Q8N6I1 236 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 FUBP1Q96AE4 644 aaKnown RBP15.38■□□□□ 0.05
VPS26A-207ENST00000490696 FCRL5Q96RD9 977 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 MLPHQ9BV36 600 aaPredicted RBP15.38■□□□□ 0.05
VPS26A-207ENST00000490696 TRHDEQ9UKU6 1024 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 DNPEPQ9ULA0 475 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 SPEGQ15772 3267 aa15.38■□□□□ 0.05
VPS26A-207ENST00000490696 GOLGA4Q13439 2230 aaKnown RBP15.37■□□□□ 0.05
VPS26A-207ENST00000490696 TCRBV7S2A1N4TA0A589 114 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 TRIM38O00635 465 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 TNFSF14O43557 240 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 PMPCBO75439 489 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 DKK1O94907 266 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 CLDN7O95471 211 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 HOXC4P09017 264 aaPredicted RBP15.37■□□□□ 0.05
VPS26A-207ENST00000490696 C1SP09871 688 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 ATXN1LP0C7T5 689 aaKnown RBP15.37■□□□□ 0.05
VPS26A-207ENST00000490696 FTH1P19P0C7X4 201 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 GIMD1P0DJR0 217 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 KIAA1024LP59773 190 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 PCSK7Q16549 785 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 MEI1Q5TIA1 1274 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 KDELC1Q6UW63 502 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 NYAP1Q6ZVC0 841 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 KDELC2Q7Z4H8 507 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 SLCO6A1Q86UG4 719 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 RAVER1Q8IY67 606 aaKnown RBP15.37■□□□□ 0.05
VPS26A-207ENST00000490696 RBFAQ8N0V3 343 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 ZNF548Q8NEK5 533 aaPredicted RBP15.37■□□□□ 0.05
VPS26A-207ENST00000490696 OXNAD1Q96HP4 312 aaPredicted RBP15.37■□□□□ 0.05
VPS26A-207ENST00000490696 ALS2CR12Q96Q35 445 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 TCEAL2Q9H3H9 227 aaPredicted RBP15.37■□□□□ 0.05
VPS26A-207ENST00000490696 USP29Q9HBJ7 922 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 UBP1Q9NZI7 540 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 FTSJ1Q9UET6 329 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 FAM153AQ9UHL3 310 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 WASF3Q9UPY6 502 aa15.37■□□□□ 0.05
VPS26A-207ENST00000490696 R3HDM2Q9Y2K5 976 aaKnown RBP15.37■□□□□ 0.05
VPS26A-207ENST00000490696 C1orf232A0A0U1RR37 186 aa15.36■□□□□ 0.05
VPS26A-207ENST00000490696 GOLGA6L9A6NEM1 432 aa15.36■□□□□ 0.05
VPS26A-207ENST00000490696 H3BM21 787 aa15.36■□□□□ 0.05
VPS26A-207ENST00000490696 SCAMP1O15126 338 aa15.36■□□□□ 0.05
VPS26A-207ENST00000490696 NDST3O95803 873 aa15.36■□□□□ 0.05
VPS26A-207ENST00000490696 TSHRP16473 764 aa15.36■□□□□ 0.05
VPS26A-207ENST00000490696 HTR1BP28222 390 aa15.36■□□□□ 0.05
VPS26A-207ENST00000490696 TEAD1P28347 426 aa15.36■□□□□ 0.05
VPS26A-207ENST00000490696 WNT3AP56704 352 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms