RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 VPS9D1Q9Y2B5 631 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 SSX2IPQ9Y2D8 614 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 BPTFQ12830 3046 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 TEX28O15482 410 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 ZBTB14O43829 449 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 GREM1O60565 184 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 CD160O95971 181 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 TIMP1P01033 207 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 LPOP22079 712 aaPredicted RBP16.09■□□□□ 0.17
SNX5-214ENST00000490175 NFKB2Q00653 900 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 SEMA3AQ14563 771 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 PTPRCAPQ14761 206 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 LSM12Q3MHD2 195 aaKnown RBP16.09■□□□□ 0.17
SNX5-214ENST00000490175 ACSBG2Q5FVE4 666 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 GPR158Q5T848 1215 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 TMEM207Q6UWW9 146 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 ISCA2Q86U28 154 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 PHTF2Q8N3S3 785 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 CARNMT1Q8N4J0 409 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 CPSF7Q8N684 471 aaKnown RBP16.09■□□□□ 0.17
SNX5-214ENST00000490175 DIS3LQ8TF46 1054 aaKnown RBP16.09■□□□□ 0.17
SNX5-214ENST00000490175 MOCOSQ96EN8 888 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 TMA16Q96EY4 203 aaKnown RBP16.09■□□□□ 0.17
SNX5-214ENST00000490175 FEM1AQ9BSK4 669 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 AARSD1Q9BTE6 412 aaKnown RBP16.09■□□□□ 0.17
SNX5-214ENST00000490175 THTPAQ9BU02 230 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 MRGBPQ9NV56 204 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 HACD3Q9P035 362 aa16.09■□□□□ 0.17
SNX5-214ENST00000490175 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.09■□□□□ 0.17
SNX5-214ENST00000490175 KIAA1671Q9BY89 1806 aa16.08■□□□□ 0.17
SNX5-214ENST00000490175 ANKRD66B4E2M5 251 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 LILRB3O75022 631 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 COX4I1P13073 169 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 HDCP19113 662 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 PAX7P23759 505 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 SATB1Q01826 763 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 NCEH1Q6PIU2 408 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 TMCO2Q7Z6W1 182 aaPredicted RBP16.08■□□□□ 0.16
SNX5-214ENST00000490175 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.08■□□□□ 0.16
SNX5-214ENST00000490175 LPCAT1Q8NF37 534 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 MDGA1Q8NFP4 955 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 OR4K2Q8NGD2 314 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 ADAMTS19Q8TE59 1207 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 AUTS2Q8WXX7 1259 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 STMN2Q93045 179 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 L3HYPDHQ96EM0 354 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 CYP2S1Q96SQ9 504 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 NUF2Q9BZD4 464 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 WDR55Q9H6Y2 383 aaPredicted RBP16.08■□□□□ 0.16
SNX5-214ENST00000490175 OR51B4Q9Y5P0 310 aa16.08■□□□□ 0.16
SNX5-214ENST00000490175 NEMP2A6NFY4 417 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 PFDN6O15212 129 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 SMNDC1O75940 238 aaKnown RBP eCLIP16.07■□□□□ 0.164e-6■■□□□ 12.9
SNX5-214ENST00000490175 IMPDH1P20839 514 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 EPHA3P29320 983 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 TIAL1Q01085 375 aaKnown RBP eCLIP16.07■□□□□ 0.164e-6■■□□□ 13.2
SNX5-214ENST00000490175 POU5F2Q8N7G0 328 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 ARL14EPQ8N8R7 260 aaPredicted RBP16.07■□□□□ 0.16
SNX5-214ENST00000490175 DCAF4L2Q8NA75 395 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 RHEBL1Q8TAI7 183 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 WDR60Q8WVS4 1066 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 USP13Q92995 863 aaPredicted RBP16.07■□□□□ 0.16
SNX5-214ENST00000490175 MAELQ96JY0 434 aaKnown RBP16.07■□□□□ 0.16
SNX5-214ENST00000490175 SLC22A12Q96S37 553 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 RTKNQ9BST9 563 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 SYTL2Q9HCH5 934 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 ACSS2Q9NR19 701 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 LHX3Q9UBR4 397 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 VPS28Q9UK41 221 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 LSM7Q9UK45 103 aaKnown RBP16.07■□□□□ 0.16
SNX5-214ENST00000490175 ARHGAP26Q9UNA1 814 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 ZNF510Q9Y2H8 683 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 PCDHGC4Q9Y5F7 938 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 CPQQ9Y646 472 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 GOLGA8QA0A0J9YX86 632 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 GOLGA8OA6NCC3 632 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 GOLGA8NF8WBI6 632 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 SNAP91O60641 907 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 SMIM24O75264 130 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 BAIAP3O94812 1187 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 PSMG1O95456 288 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 PDHA1P08559 390 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 THRAP10827 490 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 CD1DP15813 335 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 ZNF37AP17032 561 aaPredicted RBP16.07■□□□□ 0.16
SNX5-214ENST00000490175 KCNA5P22460 613 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 SP100P23497 879 aaPredicted RBP16.07■□□□□ 0.16
SNX5-214ENST00000490175 GCKP35557 465 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 PPARGP37231 505 aaPredicted RBP16.07■□□□□ 0.16
SNX5-214ENST00000490175 CDH18Q13634 790 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 ZRSR2Q15696 482 aaKnown RBP16.07■□□□□ 0.16
SNX5-214ENST00000490175 SH2D4BQ5SQS7 431 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 CAPRIN2Q6IMN6 1127 aaKnown RBP16.07■□□□□ 0.16
SNX5-214ENST00000490175 FRMD7Q6ZUT3 714 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 PIM3Q86V86 326 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 PNPLA1Q8N8W4 532 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 LPGAT1Q92604 370 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 YME1L1Q96TA2 773 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 ZNF385DQ9H6B1 395 aa16.07■□□□□ 0.16
SNX5-214ENST00000490175 ALG9Q9H6U8 611 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms