RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 PDP2Q9P2J9 529 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 ABT1Q9ULW3 272 aaKnown RBP15.73■□□□□ 0.11
BRD9-208ENST00000489816 SCML2Q9UQR0 700 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 FAM149AA5PLN7 773 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 SLCO1B7G3V0H7 640 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 MRASO14807 208 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 ALDOCP09972 364 aaKnown RBP15.72■□□□□ 0.11
BRD9-208ENST00000489816 CKMT2P17540 419 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 PRDX3P30048 256 aaKnown RBP15.72■□□□□ 0.11
BRD9-208ENST00000489816 RARS2Q5T160 578 aaKnown RBP15.72■□□□□ 0.11
BRD9-208ENST00000489816 AFMIDQ63HM1 303 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 PAQR3Q6TCH7 311 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 ADGRG6Q86SQ4 1221 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 DCP1BQ8IZD4 617 aaKnown RBP15.72■□□□□ 0.11
BRD9-208ENST00000489816 CPSF7Q8N684 471 aaKnown RBP15.72■□□□□ 0.11
BRD9-208ENST00000489816 CALML6Q8TD86 181 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 UBXN10Q96LJ8 280 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 TRIM62Q9BVG3 475 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 TRIM4Q9C037 500 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 VCX3BQ9H321 246 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 AKTIPQ9H8T0 292 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 PRDM5Q9NQX1 630 aaPredicted RBP15.72■□□□□ 0.11
BRD9-208ENST00000489816 VPS45Q9NRW7 570 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 IKZF3Q9UKT9 509 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 PRPF19Q9UMS4 504 aaKnown RBP15.72■□□□□ 0.11
BRD9-208ENST00000489816 AURKCQ9UQB9 309 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 SPO11Q9Y5K1 396 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 UNCXA6NJT0 531 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 NPHS1O60500 1241 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 DNAJB2P25686 324 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 AGTR2P50052 363 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 APLP1P51693 650 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 CLCN5P51795 746 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 ZNF33AQ06730 810 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 CNPY1Q3B7I2 92 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 LIN52Q52LA3 116 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 UNC50Q53HI1 259 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 TUBGCP3Q96CW5 907 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 CIB1Q99828 191 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 DNAJC15Q9Y5T4 150 aa15.72■□□□□ 0.11
BRD9-208ENST00000489816 A0A1B0GVG6 124 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 ZNF839A8K0R7 811 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 IQCF5A8MTL0 148 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 CBX4O00257 560 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 ADAM12O43184 909 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 KPNA6O60684 536 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 TIPRLO75663 272 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 RBP1P09455 135 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 ADGRE1Q14246 886 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 DENND1CQ8IV53 801 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 COLGALT2Q8IYK4 626 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 ZNF683Q8IZ20 524 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 ATP6V0D2Q8N8Y2 350 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 OR4K2Q8NGD2 314 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 GRIN3AQ8TCU5 1115 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 CCDC28BQ9BUN5 200 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.71■□□□□ 0.112e-6■□□□□ 10.2
BRD9-208ENST00000489816 SMPD4Q9NXE4 827 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 RNF186Q9NXI6 227 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 SUPT3HB4E1H0 165 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 ACOT8O14734 319 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 PIP5K1BO14986 540 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 OR1I1O60431 355 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 SUPT3HO75486 399 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 GJB5O95377 273 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 MT-ND1P03886 318 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 MTX3Q5HYI7 312 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 OGFRL1Q5TC84 451 aaPredicted RBP15.71■□□□□ 0.11
BRD9-208ENST00000489816 SLC24A5Q71RS6 500 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 MYO1HQ8N1T3 1032 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 BTN2A3PQ96KV6 586 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 ACOX2Q99424 681 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 GRIP2Q9C0E4 1043 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 FBXO44Q9H4M3 255 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 NOL11Q9H8H0 719 aaKnown RBP15.71■□□□□ 0.11
BRD9-208ENST00000489816 TMEM248Q9NWD8 314 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 RIMS3Q9UJD0 308 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 ZNF236Q9UL36 1845 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 MYO7AQ13402 2215 aa15.71■□□□□ 0.11
BRD9-208ENST00000489816 CDK14O94921 469 aa15.71■□□□□ 0.1
BRD9-208ENST00000489816 SLC6A4P31645 630 aa15.71■□□□□ 0.1
BRD9-208ENST00000489816 KPNA2P52292 529 aaKnown RBP15.71■□□□□ 0.1
BRD9-208ENST00000489816 CHN2P52757 468 aa15.71■□□□□ 0.1
BRD9-208ENST00000489816 ACAP2Q15057 778 aa15.71■□□□□ 0.1
BRD9-208ENST00000489816 FUT11Q495W5 492 aa15.71■□□□□ 0.1
BRD9-208ENST00000489816 RTP2Q5QGT7 225 aa15.71■□□□□ 0.1
BRD9-208ENST00000489816 ZNF678Q5SXM1 525 aa15.71■□□□□ 0.1
BRD9-208ENST00000489816 RETREG3Q86VR2 466 aa15.71■□□□□ 0.1
BRD9-208ENST00000489816 C19orf60Q96EN9 201 aa15.71■□□□□ 0.1
BRD9-208ENST00000489816 SLC30A3Q99726 388 aa15.71■□□□□ 0.1
BRD9-208ENST00000489816 POLR1EQ9GZS1 481 aaKnown RBP15.71■□□□□ 0.1
BRD9-208ENST00000489816 EML4Q9HC35 981 aaKnown RBP15.71■□□□□ 0.1
BRD9-208ENST00000489816 A8MX80 341 aa15.7■□□□□ 0.1
BRD9-208ENST00000489816 CDC7O00311 574 aa15.7■□□□□ 0.1
BRD9-208ENST00000489816 RHOBTB1O94844 696 aa15.7■□□□□ 0.1
BRD9-208ENST00000489816 SNRPB2P08579 225 aaKnown RBP15.7■□□□□ 0.1
BRD9-208ENST00000489816 TYMPP19971 482 aa15.7■□□□□ 0.1
BRD9-208ENST00000489816 GRIA3P42263 894 aa15.7■□□□□ 0.1
BRD9-208ENST00000489816 DIO3P55073 304 aa15.7■□□□□ 0.1
BRD9-208ENST00000489816 SERINC3Q13530 473 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms