RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 GALNT15Q8N3T1 639 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 PGBD5Q8N414 524 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 TEX26Q8N6G2 289 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 EID2Q8N6I1 236 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 FAM71DQ8N9W8 422 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 HNRNPLLQ8WVV9 542 aaKnown RBP10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 HTR3CQ8WXA8 447 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 EXOC2Q96KP1 924 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 CNDP2Q96KP4 475 aaKnown RBP10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 NSMCE3Q96MG7 304 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 ZNF641Q96N77 438 aaPredicted RBP10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 ZNF599Q96NL3 588 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 TRIM51Q9BSJ1 452 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 CINPQ9BW66 212 aaPredicted RBP10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 C1QTNF7Q9BXJ2 289 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 CEP41Q9BYV8 373 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 ARFGAP3Q9NP61 516 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 DMGDHQ9UI17 866 aaKnown RBP10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 ZNF148Q9UQR1 794 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 ITM2BQ9Y287 266 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 PCDHGA1Q9Y5H4 931 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 EPG5Q9HCE0 2579 aa10.62□□□□□ -0.71
SCAMP4-208ENST00000489554 TMEM131Q92545 1883 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 COL5A1P20908 1838 aaPredicted RBP10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 CFAP69A5D8W1 941 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 C5orf60A6NFR6 353 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 GOLGA8CPA6NN73 597 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 INSIG1O15503 277 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 KCNN4O15554 427 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 GCATO75600 419 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 TM7SF2O76062 418 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 C1SP09871 688 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 TIMP2P16035 220 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 H2AFXP16104 143 aaPredicted RBP10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 SERPINA4P29622 427 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 RPL22P35268 128 aaKnown RBP10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 RENBPP51606 427 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 DR1Q01658 176 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 NSUN2Q08J23 767 aaKnown RBP eCLIP10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 AP1B1Q10567 949 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 GPS2Q13227 327 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 PTK6Q13882 451 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 DHX34Q14147 1143 aaKnown RBP10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 TMCO4Q5TGY1 634 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 BRAT1Q6PJG6 821 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 CCNI2Q6ZMN8 369 aaPredicted RBP10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 TMPRSS7Q7RTY8 843 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 SRLQ86TD4 932 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 KLHDC8BQ8IXV7 354 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 ZNF567Q8N184 647 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 KDF1Q8NAX2 398 aaPredicted RBP10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 CCNYQ8ND76 341 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 CXorf40AQ8TE69 158 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 SEC14L1Q92503 715 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 BMFQ96LC9 184 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 KLF6Q99612 283 aaPredicted RBP10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 ACBD3Q9H3P7 528 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 SUV39H2Q9H5I1 410 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 ATP13A3Q9H7F0 1226 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 PCDH9Q9HC56 1237 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 GPR27Q9NS67 375 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 SEPT3Q9UH03 358 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 GGT7Q9UJ14 662 aa10.61□□□□□ -0.71
SCAMP4-208ENST00000489554 SPTY2D1-AS1A0A0U1RR47 76 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 POM121BA6NF01 834 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 H3BM21 787 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 TOR1BO14657 336 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 RAD51BO15315 384 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 SDC3O75056 442 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 RFPL3O75679 317 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 PIGNO95427 931 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 METTL18O95568 372 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 ECEL1O95672 775 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 JCHAINP01591 159 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 HLA-DQB2P05538 268 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 CCNB1P14635 433 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 STIP1P31948 543 aaKnown RBP10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 HSPA9P38646 679 aaKnown RBP10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 RGRP47804 291 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 PFN3P60673 137 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 AP1S1P61966 158 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 HNRNPKP61978 463 aaKnown RBP eCLIP10.6□□□□□ -0.711e-9■□□□□ 10.2
SCAMP4-208ENST00000489554 SLC7A5Q01650 507 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 LBRQ14739 615 aaKnown RBP10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 NAA30Q147X3 362 aaPredicted RBP10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 TRADDQ15628 312 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 TRIP13Q15645 432 aaPredicted RBP10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 UGP2Q16851 508 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 TMEM52BQ4KMG9 183 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 TEX44Q53QW1 395 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 LRRC73Q5JTD7 316 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 ANKRD20A2Q5SQ80 823 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 ANKRD20A1Q5TYW2 823 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 ANKRD20A3Q5VUR7 823 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 DUPD1Q68J44 220 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 ALG1LQ6GMV1 187 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 ERAP2Q6P179 960 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 WDR93Q6P2C0 686 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 PARGQ86W56 976 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 SLC22A18ASQ8N1D0 253 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms