RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 UCKL1Q9NWZ5 548 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 GOLGA6AQ9NYA3 693 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 NLGN3Q9NZ94 848 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 KLQ9UEF7 1012 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 APOBEC3BQ9UH17 382 aaKnown RBP14.3□□□□□ -0.12
BRCA1-218ENST00000489037 DOLKQ9UPQ8 538 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 OR1A2Q9Y585 309 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 PCDHGA1Q9Y5H4 931 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 PTPRBP23467 1997 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 GOLGA6L9A6NEM1 432 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 CAPN8A6NHC0 703 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 SIGLEC6O43699 453 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 TNFP01375 233 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 PECAM1P16284 738 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-218ENST00000489037 TSHRP16473 764 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 DUSP3P51452 185 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-218ENST00000489037 KIAA1024LP59773 190 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 SKOR1P84550 965 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 XRCC4Q13426 336 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 PRKD1Q15139 912 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-218ENST00000489037 PRRT3Q5FWE3 981 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 ESRP1Q6NXG1 681 aaKnown RBP14.29□□□□□ -0.12
BRCA1-218ENST00000489037 PNCKQ6P2M8 343 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 KDM7AQ6ZMT4 941 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 B4GALNT4Q76KP1 1039 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 RD3Q7Z3Z2 195 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 HID1Q8IV36 788 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 GALNT15Q8N3T1 639 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 LRRC57Q8N9N7 239 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 ZNF548Q8NEK5 533 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-218ENST00000489037 CCHCR1Q8TD31 782 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 UBE2Q2Q8WVN8 375 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 SCG3Q8WXD2 468 aaKnown RBP14.29□□□□□ -0.12
BRCA1-218ENST00000489037 DTD2Q96FN9 168 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 IMP4Q96G21 291 aaKnown RBP14.29□□□□□ -0.12
BRCA1-218ENST00000489037 TBATAQ96M53 351 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 RBM15Q96T37 977 aaKnown RBP eCLIP14.29□□□□□ -0.12
BRCA1-218ENST00000489037 MLPHQ9BV36 600 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-218ENST00000489037 WDR26Q9H7D7 661 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 GLOD4Q9HC38 313 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 PHPT1Q9NRX4 125 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-218ENST00000489037 NCKIPSDQ9NZQ3 722 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 KLHL8Q9P2G9 620 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-218ENST00000489037 NEUROG3Q9Y4Z2 214 aa14.29□□□□□ -0.12
BRCA1-218ENST00000489037 ANKRD66B4E2M5 251 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 TRIM38O00635 465 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 RFPL3O75679 317 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 ZNF189O75820 626 aaPredicted RBP14.28□□□□□ -0.12
BRCA1-218ENST00000489037 STK10O94804 968 aaKnown RBP14.28□□□□□ -0.12
BRCA1-218ENST00000489037 PYGLP06737 847 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 ANXA6P08133 673 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 HOXC4P09017 264 aaPredicted RBP14.28□□□□□ -0.12
BRCA1-218ENST00000489037 LHCGRP22888 699 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 PTPN3P26045 913 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 PTPN7P35236 360 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 ETV3P41162 512 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 HK3P52790 923 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 SRP54P61011 504 aaKnown RBP14.28□□□□□ -0.12
BRCA1-218ENST00000489037 DNAJC3Q13217 504 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 ILKQ13418 452 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 ELOCQ15369 112 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 SLC14A2Q15849 920 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 TPRG1LQ5T0D9 272 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 LRRC66Q68CR7 880 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 RAET1GQ6H3X3 334 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 CRTC1Q6UUV9 634 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 Q6ZVL8 140 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 PID1Q7Z2X4 250 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 HSD11B1LQ7Z5J1 315 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 TSPAN33Q86UF1 283 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 RAVER1Q8IY67 606 aaKnown RBP14.28□□□□□ -0.12
BRCA1-218ENST00000489037 FSTL5Q8N475 847 aaPredicted RBP14.28□□□□□ -0.12
BRCA1-218ENST00000489037 PLA2G15Q8NCC3 412 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 OR56A4Q8NGH8 313 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 HTR3CQ8WXA8 447 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 TSACCQ96A04 125 aaPredicted RBP14.28□□□□□ -0.12
BRCA1-218ENST00000489037 TEKT5Q96M29 485 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 QKIQ96PU8 341 aaKnown RBP eCLIP14.28□□□□□ -0.12
BRCA1-218ENST00000489037 SRPK1Q96SB4 655 aaKnown RBP14.28□□□□□ -0.12
BRCA1-218ENST00000489037 USP29Q9HBJ7 922 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 TRIM10Q9UDY6 481 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 MOSPD1Q9UJG1 213 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 TRHDEQ9UKU6 1024 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 GUCA1BQ9UMX6 200 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 ADGRG1Q9Y653 693 aa14.28□□□□□ -0.12
BRCA1-218ENST00000489037 C1orf232A0A0U1RR37 186 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 K7ESM1 405 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 TPP1O14773 563 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 TOP3BO95985 862 aaKnown RBP14.27□□□□□ -0.13
BRCA1-218ENST00000489037 PRLP01236 227 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 MMP2P08253 660 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 SPINK2P20155 84 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 TRIM23P36406 574 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 GPR1P46091 355 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 RPIAP49247 311 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 CDK18Q07002 472 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 ADCY2Q08462 1091 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 C1orf61Q13536 156 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 PCSK7Q16549 785 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 QPCTQ16769 361 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms