RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 N4BP2L1Q5TBK1 243 aaPredicted RBP13.36□□□□□ -0.27
CHD1L-208ENST00000488864 PDPK2PQ6A1A2 396 aa13.36□□□□□ -0.27
CHD1L-208ENST00000488864 FBXW8Q8N3Y1 598 aa13.36□□□□□ -0.27
CHD1L-208ENST00000488864 CARNMT1Q8N4J0 409 aa13.36□□□□□ -0.27
CHD1L-208ENST00000488864 WFDC5Q8TCV5 224 aa13.36□□□□□ -0.27
CHD1L-208ENST00000488864 JADE3Q92613 823 aa13.36□□□□□ -0.27
CHD1L-208ENST00000488864 SMARCD2Q92925 531 aa13.36□□□□□ -0.27
CHD1L-208ENST00000488864 HMCESQ96FZ2 354 aa13.36□□□□□ -0.27
CHD1L-208ENST00000488864 CDX2Q99626 313 aaPredicted RBP13.36□□□□□ -0.27
CHD1L-208ENST00000488864 EPB41L1Q9H4G0 881 aa13.36□□□□□ -0.27
CHD1L-208ENST00000488864 CLEC4EQ9ULY5 219 aa13.36□□□□□ -0.27
CHD1L-208ENST00000488864 DTNAQ9Y4J8 743 aa13.36□□□□□ -0.27
CHD1L-208ENST00000488864 SHROOM3Q8TF72 1996 aa13.36□□□□□ -0.27
CHD1L-208ENST00000488864 MYOCOSA0A1B0GUC4 107 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 ZNF195O14628 629 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 METTL18O95568 372 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 NCF2P19878 526 aaPredicted RBP13.35□□□□□ -0.27
CHD1L-208ENST00000488864 KCNA5P22460 613 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 ACVRL1P37023 503 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 GARSP41250 739 aaKnown RBP13.35□□□□□ -0.27
CHD1L-208ENST00000488864 GK3PQ14409 553 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 FSCBQ5H9T9 825 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 OGFRL1Q5TC84 451 aaPredicted RBP13.35□□□□□ -0.27
CHD1L-208ENST00000488864 KBTBD6Q86V97 674 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 TMEM25Q86YD3 366 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHD1L-208ENST00000488864 CELF5Q8N6W0 485 aaKnown RBP13.35□□□□□ -0.27
CHD1L-208ENST00000488864 SMRP1Q8NCR6 262 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 DNAAF2Q9NVR5 837 aaKnown RBP13.35□□□□□ -0.27
CHD1L-208ENST00000488864 CDH7Q9ULB5 785 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 MYO18AQ92614 2054 aaKnown RBP13.35□□□□□ -0.27
CHD1L-208ENST00000488864 A0A1B0GVM2 712 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 TCAF2A6NFQ2 919 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 WASH4PA8MWX3 477 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 H0Y626 953 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 RAMP2O60895 175 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 LATS1O95835 1130 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 PRKCGP05129 697 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 PMLP29590 882 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 CDH4P55283 916 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 GALNT2Q10471 571 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 PCLAFQ15004 111 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 POLD3Q15054 466 aaPredicted RBP13.35□□□□□ -0.27
CHD1L-208ENST00000488864 SMAD1Q15797 465 aaKnown RBP13.35□□□□□ -0.27
CHD1L-208ENST00000488864 NADK2Q4G0N4 442 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 ACBD5Q5T8D3 534 aaPredicted RBP13.35□□□□□ -0.27
CHD1L-208ENST00000488864 HEATR6Q6AI08 1181 aaKnown RBP13.35□□□□□ -0.27
CHD1L-208ENST00000488864 TANGO2Q6ICL3 276 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 C10orf107Q8IVU9 208 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 OR7D4Q8NG98 312 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 GSDMBQ8TAX9 411 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 DCUN1D1Q96GG9 259 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 QKIQ96PU8 341 aaKnown RBP eCLIP13.35□□□□□ -0.275e-7■■□□□ 13.1
CHD1L-208ENST00000488864 DDX18Q9NVP1 670 aaKnown RBP13.35□□□□□ -0.27
CHD1L-208ENST00000488864 GDE1Q9NZC3 331 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 TRIOO75962 3097 aa13.35□□□□□ -0.27
CHD1L-208ENST00000488864 HELZP42694 1942 aaKnown RBP13.35□□□□□ -0.27
CHD1L-208ENST00000488864 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.34□□□□□ -0.27
CHD1L-208ENST00000488864 PEX1O43933 1283 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 DNAJA2O60884 412 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 ZNF177Q13360 481 aaPredicted RBP13.34□□□□□ -0.27
CHD1L-208ENST00000488864 ANO4Q32M45 955 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 C5orf22Q49AR2 442 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 CDKL3Q8IVW4 592 aaPredicted RBP13.34□□□□□ -0.27
CHD1L-208ENST00000488864 FAM217AQ8IXS0 508 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 UMODL1-AS1Q8N2C9 162 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 ATPAF2Q8N5M1 289 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 LZTR1Q8N653 840 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 DEFB123Q8N688 67 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 USP33Q8TEY7 942 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 HTR3CQ8WXA8 447 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 ASIC4Q96FT7 647 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 RIPOR3Q96MK2 946 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 BTBD9Q96Q07 612 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 EBNA1BP2Q99848 306 aaKnown RBP13.34□□□□□ -0.27
CHD1L-208ENST00000488864 PRDM16Q9HAZ2 1276 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 PTTG2Q9NZH5 202 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 NDUFA13Q9P0J0 144 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 ZMYM5Q9UJ78 669 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 ZNF510Q9Y2H8 683 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 BCLAF3A2AJT9 711 aaKnown RBP13.34□□□□□ -0.27
CHD1L-208ENST00000488864 TYW5A2RUC4 315 aaKnown RBP13.34□□□□□ -0.27
CHD1L-208ENST00000488864 SOBPA7XYQ1 873 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 HEPACAM2A8MVW5 462 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 NEDD8-MDP1E9PL57 170 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 J3KR12 359 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 GFRA2O00451 464 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 TPP1O14773 563 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 ZBTB14O43829 449 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 CLDN11O75508 207 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 ALDOAP04075 364 aaKnown RBP13.34□□□□□ -0.27
CHD1L-208ENST00000488864 MX2P20592 715 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 HOXD9P28356 352 aaPredicted RBP13.34□□□□□ -0.27
CHD1L-208ENST00000488864 RPL5P46777 297 aaKnown RBP13.34□□□□□ -0.27
CHD1L-208ENST00000488864 RPL26P61254 145 aaKnown RBP13.34□□□□□ -0.27
CHD1L-208ENST00000488864 CDH18Q13634 790 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 ITGA9Q13797 1035 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 PDE1CQ14123 709 aaPredicted RBP13.34□□□□□ -0.27
CHD1L-208ENST00000488864 LY6G5CQ5SRR4 150 aa13.34□□□□□ -0.27
CHD1L-208ENST00000488864 PAOXQ6QHF9 649 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms