RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 SNX19Q92543 992 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 KLK6Q92876 244 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 FAM131CQ96AQ9 280 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 CFAP36Q96G28 342 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 LYSMD1Q96S90 227 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 SRPK1Q96SB4 655 aaKnown RBP12.33□□□□□ -0.44
TRAIP-209ENST00000488860 GPR174Q9BXC1 333 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 TRABDQ9H4I3 376 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 ZFYVE1Q9HBF4 777 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 PREBQ9HCU5 417 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 BPIFA1Q9NP55 256 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 TCAF1Q9Y4C2 921 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 SPAG17Q6Q759 2223 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 A0A1W2PQU0 124 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 SDR42E2A6NKP2 422 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 C2orf81A6NN90 581 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 STX7O15400 261 aaKnown RBP12.32□□□□□ -0.44
TRAIP-209ENST00000488860 MYBL2P10244 700 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 C7P10643 843 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 TDGF1P13385 188 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 ADRA1DP25100 572 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 TNFRSF8P28908 595 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 ELK3P41970 407 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 MAGEA3P43357 314 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 STC1P52823 247 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 PTPRCAPQ14761 206 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 FASTKD3Q14CZ7 662 aaKnown RBP12.32□□□□□ -0.44
TRAIP-209ENST00000488860 ANGPT1Q15389 498 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 SMAD1Q15797 465 aaKnown RBP12.32□□□□□ -0.44
TRAIP-209ENST00000488860 MAP7D1Q3KQU3 841 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 PCID2Q5JVF3 399 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 ALS2CLQ60I27 953 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 KIAA1161Q6NSJ0 714 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 CES3Q6UWW8 571 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 LIPIQ6XZB0 460 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 CAPN12Q6ZSI9 719 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 HSD11B1LQ7Z5J1 315 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 LONP2Q86WA8 852 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 ZBED8Q8IZ13 594 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 AGGF1Q8N302 714 aaeCLIP12.32□□□□□ -0.44
TRAIP-209ENST00000488860 DEFB119Q8N690 84 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 GPR161Q8N6U8 529 aaKnown RBP12.32□□□□□ -0.44
TRAIP-209ENST00000488860 OR4K2Q8NGD2 314 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 OR13C4Q8NGS5 318 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 OR2T34Q8NGX1 318 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 BRSK1Q8TDC3 778 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 ZNF669Q96BR6 464 aaPredicted RBP12.32□□□□□ -0.44
TRAIP-209ENST00000488860 STAMBPL1Q96FJ0 436 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 DNAJC1Q96KC8 554 aaKnown RBP12.32□□□□□ -0.44
TRAIP-209ENST00000488860 RANBP9Q96S59 729 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 TRIM56Q9BRZ2 755 aaKnown RBP12.32□□□□□ -0.44
TRAIP-209ENST00000488860 WSB2Q9NYS7 404 aaPredicted RBP12.32□□□□□ -0.44
TRAIP-209ENST00000488860 PKD2L2Q9NZM6 624 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 CD84Q9UIB8 345 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 FBXO4Q9UKT5 387 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 PKP3Q9Y446 797 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 KCTD3Q9Y597 815 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 BPTFQ12830 3046 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 FANCMQ8IYD8 2048 aa12.32□□□□□ -0.44
TRAIP-209ENST00000488860 IGLON5A6NGN9 336 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 H0Y858 1186 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 CCL22O00626 93 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 MAP3K13O43283 966 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 LDB2O43679 373 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 GPR37L1O60883 481 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 TM7SF2O76062 418 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 FSBPO95073 299 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 BCKDHBP21953 392 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 LPOP22079 712 aaPredicted RBP12.31□□□□□ -0.44
TRAIP-209ENST00000488860 MCM3P25205 808 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 ETV3P41162 512 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 ZNF140P52738 457 aaPredicted RBP12.31□□□□□ -0.44
TRAIP-209ENST00000488860 RPS21P63220 83 aaKnown RBP12.31□□□□□ -0.44
TRAIP-209ENST00000488860 PDE1BQ01064 536 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 RPL6Q02878 288 aaKnown RBP12.31□□□□□ -0.44
TRAIP-209ENST00000488860 PTSQ03393 145 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 SRSF5Q13243 272 aaKnown RBP12.31□□□□□ -0.44
TRAIP-209ENST00000488860 MSLNQ13421 630 aaPredicted RBP12.31□□□□□ -0.44
TRAIP-209ENST00000488860 LAMB3Q13751 1172 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 CDKN3Q16667 212 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 TSTD2Q5T7W7 516 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 RFLNAQ6ZTI6 216 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 TMC3Q7Z5M5 1100 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 HORMAD1Q86X24 394 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 FBXO36Q8NEA4 188 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 MYRIPQ8NFW9 859 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 STYXQ8WUJ0 223 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 NUS1Q96E22 293 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 SIGLEC10Q96LC7 697 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 MYOCQ99972 504 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 WDR83Q9BRX9 315 aaKnown RBP12.31□□□□□ -0.44
TRAIP-209ENST00000488860 C1QTNF1Q9BXJ1 281 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 PARD6BQ9BYG5 372 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 FOXP3Q9BZS1 431 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 KDM4CQ9H3R0 1056 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 C6orf106Q9H6K1 298 aaPredicted RBP12.31□□□□□ -0.44
TRAIP-209ENST00000488860 CHRAC1Q9NRG0 131 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 SLC2A6Q9UGQ3 507 aa12.31□□□□□ -0.44
TRAIP-209ENST00000488860 MBD1Q9UIS9 605 aaPredicted RBP12.31□□□□□ -0.44
TRAIP-209ENST00000488860 SOX13Q9UN79 622 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms