RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 NCKIPSDQ9NZQ3 722 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 SEPT10Q9P0V9 454 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 SPEGQ15772 3267 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 PTPRBP23467 1997 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 A0A0J9YYE9 177 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 A0A0U1RQS6 177 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 YY2O15391 372 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 TNFP01375 233 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 TRBC1P01850 177 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 CELA2BP08218 269 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-209ENST00000487617 HOXC4P09017 264 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-209ENST00000487617 KELP23276 732 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 TRIM23P36406 574 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 CD86P42081 329 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 TARDBPQ13148 414 aaKnown RBP eCLIP20.44■□□□□ 0.863e-6■■■■□ 21.4
HDAC4-209ENST00000487617 CAMK2BQ13554 666 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 TFDP2Q14188 446 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 LLGL1Q15334 1064 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 NR0B2Q15466 257 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 TCEA2Q15560 299 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 CDKN3Q16667 212 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 KAZNQ674X7 775 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 C11orf63Q6NUN7 778 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 SPOCD1Q6ZMY3 1216 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 Q6ZVL8 140 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 DAAM2Q86T65 1068 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 CNTD1Q8N815 330 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 PDCD7Q8N8D1 485 aaKnown RBP20.44■□□□□ 0.86
HDAC4-209ENST00000487617 LPCAT1Q8NF37 534 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 MDM1Q8TC05 714 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 IFI44Q8TCB0 444 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 GLMNQ92990 594 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 PDXPQ96GD0 296 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 CEP41Q9BYV8 373 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 BRD8Q9H0E9 1235 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 PCDH9Q9HC56 1237 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 PLXNB3Q9ULL4 1909 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 IGF2RP11717 2491 aa20.44■□□□□ 0.86
HDAC4-209ENST00000487617 FRYQ5TBA9 3013 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 AKAP13Q12802 2813 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 CPED1A4D0V7 1026 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 GOLGA6CA6NDK9 693 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 GOLGA6BA6NDN3 693 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 RCCD1A6NED2 376 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 TMEM202A6NGA9 273 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 PDE2AO00408 941 aaPredicted RBP20.43■□□□□ 0.86
HDAC4-209ENST00000487617 CST8O60676 142 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 KRT37O76014 449 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 ZRANB2O95218 330 aaKnown RBP eCLIP20.43■□□□□ 0.86
HDAC4-209ENST00000487617 PRLP01236 227 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 CAPNS1P04632 268 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 GOLGA6DP0CG33 693 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 RPL26P61254 145 aaKnown RBP20.43■□□□□ 0.86
HDAC4-209ENST00000487617 TAZQ16635 292 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 C6orf132Q5T0Z8 1188 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 LRRC66Q68CR7 880 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 KCTD16Q68DU8 428 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 CRTC1Q6UUV9 634 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 RAD9BQ6WBX8 426 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 B4GALNT4Q76KP1 1039 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 BZW1Q7L1Q6 419 aaKnown RBP20.43■□□□□ 0.86
HDAC4-209ENST00000487617 KATNAL2Q8IYT4 538 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 SCG3Q8WXD2 468 aaKnown RBP20.43■□□□□ 0.86
HDAC4-209ENST00000487617 OR1E3Q8WZA6 343 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 BOCQ9BWV1 1114 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 LGR4Q9BXB1 951 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 FGF22Q9HCT0 170 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 PHPT1Q9NRX4 125 aaPredicted RBP20.43■□□□□ 0.86
HDAC4-209ENST00000487617 GOLGA6AQ9NYA3 693 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 MOSPD1Q9UJG1 213 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 RPL26L1Q9UNX3 145 aaKnown RBP20.43■□□□□ 0.86
HDAC4-209ENST00000487617 CLCA2Q9UQC9 943 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.43■□□□□ 0.86
HDAC4-209ENST00000487617 DGKBQ9Y6T7 804 aa20.43■□□□□ 0.86
HDAC4-209ENST00000487617 TNFRSF10CO14798 259 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 OPA1O60313 960 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 GP1BAP07359 652 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 MMP2P08253 660 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 ZNF30P17039 623 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 MARCKSL1P49006 195 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 NR2C2P49116 596 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 RPIAP49247 311 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 NAP1L1P55209 391 aaKnown RBP20.42■□□□□ 0.86
HDAC4-209ENST00000487617 SKOR1P84550 965 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 FAM182AQ5T1J6 154 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 RAET1GQ6H3X3 334 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 GUSBP11Q6P575 273 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 EFL1Q7Z2Z2 1120 aaKnown RBP20.42■□□□□ 0.86
HDAC4-209ENST00000487617 TECPR1Q7Z6L1 1165 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 HEATR4Q86WZ0 1026 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 GKN2Q86XP6 184 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 CCDC50Q8IVM0 306 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 RCOR2Q8IZ40 523 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 AGAP3Q96P47 875 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 ABCG4Q9H172 646 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 MRPL40Q9NQ50 206 aaKnown RBP20.42■□□□□ 0.86
HDAC4-209ENST00000487617 SAE1Q9UBE0 346 aaPredicted RBP20.42■□□□□ 0.86
HDAC4-209ENST00000487617 CD84Q9UIB8 345 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 DNPEPQ9ULA0 475 aa20.42■□□□□ 0.86
HDAC4-209ENST00000487617 CACNA1BQ00975 2339 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms