RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 TFAP2BQ92481 460 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 ZSWIM1Q9BR11 485 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 WRAP53Q9BUR4 548 aaKnown RBP11.69□□□□□ -0.54
TRIM56-204ENST00000487252 TRIM62Q9BVG3 475 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 OSBPL1AQ9BXW6 950 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 MIS12Q9H081 205 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 KCTD10Q9H3F6 313 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 TMEM8AQ9HCN3 771 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 SPTLC3Q9NUV7 552 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 OSGIN2Q9Y236 505 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 FER1L5A0AVI2 2057 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 ARGFXA6NJG6 315 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 TMEM200CA6NKL6 621 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 SNRPB2P08579 225 aaKnown RBP11.68□□□□□ -0.54
TRIM56-204ENST00000487252 CD19P15391 556 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 CASP14P31944 242 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 CCR1P32246 355 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 TRIM23P36406 574 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 FASLGP48023 281 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 DNA2P51530 1060 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 MTA1Q13330 715 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 ZNF235Q14590 738 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 TSR1Q2NL82 804 aaKnown RBP11.68□□□□□ -0.54
TRIM56-204ENST00000487252 ZNF517Q6ZMY9 492 aaPredicted RBP11.68□□□□□ -0.54
TRIM56-204ENST00000487252 BNC2Q6ZN30 1099 aaPredicted RBP11.68□□□□□ -0.54
TRIM56-204ENST00000487252 KRBA2Q6ZNG9 492 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 UNC13DQ70J99 1090 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 UBR7Q8N806 425 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 GLIS1Q8NBF1 620 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 PLA2G15Q8NCC3 412 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 CT55Q8WUE5 264 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 INPP5DQ92835 1189 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 FAM149B1Q96BN6 582 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 STAMBPL1Q96FJ0 436 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 KLHL32Q96NJ5 620 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 C7orf25Q9BPX7 421 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 KCNF1Q9H3M0 494 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 SLC39A2Q9NP94 309 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 PADI1Q9ULC6 663 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 FCF1Q9Y324 198 aaKnown RBP11.68□□□□□ -0.54
TRIM56-204ENST00000487252 COPG1Q9Y678 874 aaKnown RBP11.68□□□□□ -0.54
TRIM56-204ENST00000487252 MYO7BQ6PIF6 2116 aa11.68□□□□□ -0.54
TRIM56-204ENST00000487252 JMJD1CQ15652 2540 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 A0A1B0GUH1 482 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 PRSS38A1L453 326 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 GOLGA6L19H0YKK7 550 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 FUCA1P04066 466 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 NR3C1P04150 777 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 ANKRD34CP0C6C1 535 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 LPOP22079 712 aaPredicted RBP11.67□□□□□ -0.54
TRIM56-204ENST00000487252 KELP23276 732 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 HNRNPH3P31942 346 aaKnown RBP11.67□□□□□ -0.54
TRIM56-204ENST00000487252 GGCXP38435 758 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 IL10RAQ13651 578 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 CNGA2Q16280 664 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 SNAP47Q5SQN1 464 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 SYVN1Q86TM6 617 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 KCNMB4Q86W47 210 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 OR7D4Q8NG98 312 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 OR6K2Q8NGY2 324 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 ADAMTS17Q8TE56 1095 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 RELTQ969Z4 430 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 C14orf79Q96F83 325 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 GPR87Q9BY21 358 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 GSDMCQ9BYG8 508 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 TM6SF2Q9BZW4 377 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 TRIM5Q9C035 493 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 BRD8Q9H0E9 1235 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 POPDC2Q9HBU9 364 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 LHX9Q9NQ69 397 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 TRNAU1APQ9NX07 287 aaKnown RBP11.67□□□□□ -0.54
TRIM56-204ENST00000487252 C5AR2Q9P296 337 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 ZNF212Q9UDV6 495 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 ACTL7AQ9Y615 435 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 MDC1Q14676 2089 aaKnown RBP11.67□□□□□ -0.54
TRIM56-204ENST00000487252 RTTNQ86VV8 2226 aa11.67□□□□□ -0.54
TRIM56-204ENST00000487252 DRGXA6NNA5 263 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 CACNB4O00305 520 aaPredicted RBP11.66□□□□□ -0.54
TRIM56-204ENST00000487252 PDXKO00764 312 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 KIAA0754O94854 1291 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 POP4O95707 220 aaKnown RBP11.66□□□□□ -0.54
TRIM56-204ENST00000487252 GSRP00390 522 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 PCCBP05166 539 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 HTR1EP28566 365 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 GTF2H1P32780 548 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 PTGIRP43119 386 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 SUOXP51687 545 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 YWHAZP63104 245 aaKnown RBP11.66□□□□□ -0.54
TRIM56-204ENST00000487252 AMPD3Q01432 767 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 ILF3Q12906 894 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRIM56-204ENST00000487252 ADAM9Q13443 819 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 DPCR1Q3MIW9 517 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 KRT39Q6A163 491 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 IGFL3Q6UXB1 125 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 ZNF783Q6ZMS7 281 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 NXPE1Q8N323 547 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 PDILTQ8N807 584 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 OR2AP1Q8NGE2 309 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 OR10G6Q8NH81 332 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 ZNF830Q96NB3 372 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms