RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 DUS2Q9NX74 493 aaKnown RBP11.64□□□□□ -0.55
PRKCB-207ENST00000486868 KCNK4Q9NYG8 393 aa11.64□□□□□ -0.55
PRKCB-207ENST00000486868 EVLQ9UI08 416 aaPredicted RBP11.64□□□□□ -0.55
PRKCB-207ENST00000486868 SLC8A2Q9UPR5 921 aa11.64□□□□□ -0.55
PRKCB-207ENST00000486868 PKP3Q9Y446 797 aa11.64□□□□□ -0.55
PRKCB-207ENST00000486868 ZNF711Q9Y462 761 aa11.64□□□□□ -0.55
PRKCB-207ENST00000486868 PCDHB9Q9Y5E1 797 aa11.64□□□□□ -0.55
PRKCB-207ENST00000486868 CAPN8A6NHC0 703 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 G3V2L1 256 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 K7ERQ8 282 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 LTA4HP09960 611 aaKnown RBP11.63□□□□□ -0.55
PRKCB-207ENST00000486868 CISD3P0C7P0 127 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 RALBP11234 206 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 POLR2EP19388 210 aaKnown RBP11.63□□□□□ -0.55
PRKCB-207ENST00000486868 PMLP29590 882 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 BMP8BP34820 402 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 NNMTP40261 264 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 CORO7P57737 925 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 DNAJB13P59910 316 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 POLR2LP62875 67 aaKnown RBP11.63□□□□□ -0.55
PRKCB-207ENST00000486868 CACNG1Q06432 222 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 ACAP2Q15057 778 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 DLG2Q15700 870 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 CDKN3Q16667 212 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 GALNTL6Q49A17 601 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 LYPLAL1Q5VWZ2 237 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 ASTLQ6HA08 431 aaPredicted RBP11.63□□□□□ -0.55
PRKCB-207ENST00000486868 C16orf46Q6P387 395 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 KLC3Q6P597 504 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 RBM23Q86U06 439 aaKnown RBP11.63□□□□□ -0.55
PRKCB-207ENST00000486868 NPAS3Q8IXF0 933 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 KIRREL3Q8IZU9 778 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 CENPLQ8N0S6 344 aaPredicted RBP11.63□□□□□ -0.55
PRKCB-207ENST00000486868 GPATCH11Q8N954 259 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 ACVR1CQ8NER5 493 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 PPP1R14CQ8TAE6 165 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 GRIN3AQ8TCU5 1115 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 PDCD6IPQ8WUM4 868 aaKnown RBP11.63□□□□□ -0.55
PRKCB-207ENST00000486868 BHMTQ93088 406 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 VOPP1Q96AW1 172 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 SCRN2Q96FV2 425 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 ATXN7L3BQ96GX2 97 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 MCCC1Q96RQ3 725 aaPredicted RBP11.63□□□□□ -0.55
PRKCB-207ENST00000486868 TTC1Q99614 292 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 AARSD1Q9BTE6 412 aaKnown RBP11.63□□□□□ -0.55
PRKCB-207ENST00000486868 TM6SF2Q9BZW4 377 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 MRPL46Q9H2W6 279 aaKnown RBP11.63□□□□□ -0.55
PRKCB-207ENST00000486868 NKX2-4Q9H2Z4 354 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 SUV39H2Q9H5I1 410 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 CAB39LQ9H9S4 337 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 SLC28A3Q9HAS3 691 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 SYTL2Q9HCH5 934 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 OXSMQ9NWU1 459 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 MARCH4Q9P2E8 410 aaPredicted RBP11.63□□□□□ -0.55
PRKCB-207ENST00000486868 HECAQ9UBI9 543 aaPredicted RBP11.63□□□□□ -0.55
PRKCB-207ENST00000486868 APPL1Q9UKG1 709 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 ERVW-1Q9UQF0 538 aa11.63□□□□□ -0.55
PRKCB-207ENST00000486868 RUVBL2Q9Y230 463 aaKnown RBP11.63□□□□□ -0.55
PRKCB-207ENST00000486868 TSPAN11A1L157 253 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 GOLGA8CPA6NN73 597 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 AURKAO14965 403 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 PHGDHO43175 533 aaKnown RBP11.62□□□□□ -0.55
PRKCB-207ENST00000486868 DNAJC6O75061 913 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 NDUFS3O75489 264 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 ATP5HO75947 161 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 CYP17A1P05093 508 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 DLDP09622 509 aaKnown RBP11.62□□□□□ -0.55
PRKCB-207ENST00000486868 MYL2P10916 166 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 ADH5P11766 374 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 RPS3P23396 243 aaKnown RBP eCLIP11.62□□□□□ -0.55
PRKCB-207ENST00000486868 SLC8A1P32418 973 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 PBX2P40425 430 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 SKIV2L2P42285 1042 aaKnown RBP11.62□□□□□ -0.55
PRKCB-207ENST00000486868 ABL2P42684 1182 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 PTGER3P43115 390 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 NAA20P61599 178 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 XIAPP98170 497 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 SETDB1Q15047 1291 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 EIF4HQ15056 248 aaKnown RBP11.62□□□□□ -0.55
PRKCB-207ENST00000486868 GPR33Q49SQ1 333 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 ZNF697Q5TEC3 545 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 LIPMQ5VYY2 423 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 FAM91A1Q658Y4 838 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 GRAMD4Q6IC98 578 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 LRRC8EQ6NSJ5 796 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 BRAT1Q6PJG6 821 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 TPRG1Q6ZUI0 275 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 CAMK1DQ8IU85 385 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 RNF135Q8IUD6 432 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 C10orf107Q8IVU9 208 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 CEP97Q8IW35 865 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 ETFBKMTQ8IXQ9 262 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 PPP4R1Q8TF05 950 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 LPGAT1Q92604 370 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 TUBB6Q9BUF5 446 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 MECRQ9BV79 373 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 OSBPL1AQ9BXW6 950 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 GPR63Q9BZJ6 419 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 NSUN3Q9H649 340 aaKnown RBP11.62□□□□□ -0.55
PRKCB-207ENST00000486868 SUDS3Q9H7L9 328 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms