RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 FRMD1Q8N878 549 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 SIGLEC10Q96LC7 697 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 MCCC1Q96RQ3 725 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-229ENST00000486665 TPSD1Q9BZJ3 242 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 XAB2Q9HCS7 855 aaKnown RBP12.81□□□□□ -0.36
HDAC6-229ENST00000486665 USP36Q9P275 1121 aaKnown RBP12.81□□□□□ -0.36
HDAC6-229ENST00000486665 B4GALT6Q9UBX8 382 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 NFU1Q9UMS0 254 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 SCML1Q9UN30 329 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 FADS3Q9Y5Q0 445 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 CAPN8A6NHC0 703 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 NDC80O14777 642 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 TM4SF5O14894 197 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 CLDN7O95471 211 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 MYBL2P10244 700 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 LHCGRP22888 699 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 VIPR1P32241 457 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 VSNL1P62760 191 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 RALGDSQ12967 914 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 CUL1Q13616 776 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 HLTFQ14527 1009 aaKnown RBP eCLIP12.8□□□□□ -0.36
HDAC6-229ENST00000486665 PTPRCAPQ14761 206 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 POU6F1Q14863 301 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 ST3GAL2Q16842 350 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 BBS9Q3SYG4 887 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 TMEM52BQ4KMG9 183 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 CCDC38Q502W7 563 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 HP1BP3Q5SSJ5 553 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-229ENST00000486665 RFLNAQ6ZTI6 216 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 USP30Q70CQ3 517 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 DPPA4Q7L190 304 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 IGDCC3Q8IVU1 814 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 GSPT2Q8IYD1 628 aaKnown RBP12.8□□□□□ -0.36
HDAC6-229ENST00000486665 NDUFAF2Q8N183 169 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 TTC30BQ8N4P2 665 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 BLOC1S5Q8TDH9 187 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 GAB3Q8WWW8 586 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 RLN3Q8WXF3 142 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 EID2BQ96D98 161 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 LYSMD1Q96S90 227 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 WDR83Q9BRX9 315 aaKnown RBP12.8□□□□□ -0.36
HDAC6-229ENST00000486665 PARD6BQ9BYG5 372 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 MAGEE1Q9HCI5 957 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 SYBUQ9NX95 663 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 NCKAP1Q9Y2A7 1128 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 KCTD3Q9Y597 815 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 ANKRD36A6QL64 1941 aa12.8□□□□□ -0.36
HDAC6-229ENST00000486665 SDR42E2A6NKP2 422 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 GOLGA8CPA6NN73 597 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 LDB2O43679 373 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 BUD23O43709 281 aaKnown RBP12.79□□□□□ -0.36
HDAC6-229ENST00000486665 PPFIA2O75334 1257 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 RPP40O75818 363 aaKnown RBP12.79□□□□□ -0.36
HDAC6-229ENST00000486665 EPN2O95208 641 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 IGLV3-19P01714 112 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 FAM153BP0C7A2 387 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 CYP2A6P11509 494 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-229ENST00000486665 TNFRSF8P28908 595 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 ACSL1P33121 698 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 MMP12P39900 470 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 SUOXP51687 545 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 ARL4CP56559 192 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 PTSQ03393 145 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 CBLBQ13191 982 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 ELF2Q15723 593 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 HIF1AQ16665 826 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 MAP7D1Q3KQU3 841 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 FAM153CQ494X1 144 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 TTC31Q49AM3 519 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-229ENST00000486665 AASDHQ4L235 1098 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-229ENST00000486665 N4BP2L1Q5TBK1 243 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-229ENST00000486665 TCEAL6Q6IPX3 200 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 ERAP2Q6P179 960 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 USP45Q70EL2 814 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 LYSMD3Q7Z3D4 306 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 TMC3Q7Z5M5 1100 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 CBARPQ8N350 705 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-229ENST00000486665 MYRIPQ8NFW9 859 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 OR14C36Q8NHC7 312 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 BRSK1Q8TDC3 778 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 TCEAL3Q969E4 200 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 RAB7BQ96AH8 199 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 TRIM56Q9BRZ2 755 aaKnown RBP12.79□□□□□ -0.36
HDAC6-229ENST00000486665 WRAP53Q9BUR4 548 aaKnown RBP12.79□□□□□ -0.36
HDAC6-229ENST00000486665 FRMD8Q9BZ67 464 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-229ENST00000486665 CHRAC1Q9NRG0 131 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 BFARQ9NZS9 450 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 FZD4Q9ULV1 537 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 CYP8B1Q9UNU6 501 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 INVSQ9Y283 1065 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 ZNF711Q9Y462 761 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 ARL5AQ9Y689 179 aa12.79□□□□□ -0.36
HDAC6-229ENST00000486665 WDFY3Q8IZQ1 3526 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 CCDC78A2IDD5 438 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 E7ESA3 106 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 AP3B1O00203 1094 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 SLC7A4O43246 635 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 CTIFO43310 598 aaKnown RBP12.78□□□□□ -0.36
HDAC6-229ENST00000486665 PLRG1O43660 514 aaKnown RBP12.78□□□□□ -0.36
HDAC6-229ENST00000486665 AP1G1O43747 822 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms