RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 PGLSO95336 258 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 PRLP01236 227 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 TNFP01375 233 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 ALPIP09923 528 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 ELFN1P0C7U0 828 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 CYP2A6P11509 494 aaPredicted RBP7.02□□□□□ -1.29
VPS50-218ENST00000485994 CCNB1P14635 433 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 ZNF30P17039 623 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 GM2AP17900 193 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 KELP23276 732 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 VIPR1P32241 457 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 CYLC1P35663 651 aaPredicted RBP7.02□□□□□ -1.29
VPS50-218ENST00000485994 HNF1BP35680 557 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 MAGEA1P43355 309 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 RPIAP49247 311 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 IFI35P80217 286 aaPredicted RBP7.02□□□□□ -1.29
VPS50-218ENST00000485994 PPIDQ08752 370 aaKnown RBP7.02□□□□□ -1.29
VPS50-218ENST00000485994 TRAF2Q12933 501 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 DNAJC3Q13217 504 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 INPP5AQ14642 412 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 NFATC4Q14934 902 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 IRF4Q15306 451 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 ELOCQ15369 112 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 SLC14A2Q15849 920 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 TPRG1LQ5T0D9 272 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 ARMC12Q5T9G4 340 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 CDCP2Q5VXM1 449 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 PNCKQ6P2M8 343 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 OGFOD3Q6PK18 319 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 DHRS13Q6UX07 377 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 TECPR1Q7Z6L1 1165 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 PROSER1Q86XN7 944 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 TMTC1Q8IUR5 882 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 PLD5Q8N7P1 536 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 DCBLD1Q8N8Z6 715 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 ZNF548Q8NEK5 533 aaPredicted RBP7.02□□□□□ -1.29
VPS50-218ENST00000485994 OR6C4Q8NGE1 309 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 WDR48Q8TAF3 677 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 ARRDC2Q8TBH0 407 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 UBE2Q2Q8WVN8 375 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 SCARF2Q96GP6 870 aaPredicted RBP7.02□□□□□ -1.29
VPS50-218ENST00000485994 APOLD1Q96LR9 279 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 MYOCQ99972 504 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 WRAP53Q9BUR4 548 aaKnown RBP7.02□□□□□ -1.29
VPS50-218ENST00000485994 MAK16Q9BXY0 300 aaKnown RBP7.02□□□□□ -1.29
VPS50-218ENST00000485994 SLC13A1Q9BZW2 595 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 LUC7LQ9NQ29 371 aaKnown RBP7.02□□□□□ -1.29
VPS50-218ENST00000485994 SPTLC3Q9NUV7 552 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 RBM22Q9NW64 420 aaKnown RBP eCLIP7.02□□□□□ -1.29
VPS50-218ENST00000485994 B4GALT6Q9UBX8 382 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 ZMIZ1Q9ULJ6 1067 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 PNMA8BQ9ULN7 279 aaPredicted RBP7.02□□□□□ -1.29
VPS50-218ENST00000485994 EFR3BQ9Y2G0 817 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 U3KQA8 63 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 FREM2Q5SZK8 3169 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 LAMA5O15230 3695 aa7.02□□□□□ -1.29
VPS50-218ENST00000485994 LRP4O75096 1905 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 AHCTF1Q8WYP5 2266 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 ZFC3H1O60293 1989 aaKnown RBP7.01□□□□□ -1.29
VPS50-218ENST00000485994 A0A0J9YYE9 177 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 RGSL1A5PLK6 1076 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 TRABD2BA6NFA1 517 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 SRRM3A6NNA2 597 aaPredicted RBP7.01□□□□□ -1.29
VPS50-218ENST00000485994 YY2O15391 372 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 PSTPIP1O43586 416 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 MFSD11O43934 449 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 SDC3O75056 442 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 GCATO75600 419 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 CPP00450 1065 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 TRBC1P01850 177 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 PYGLP06737 847 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 PDHA1P08559 390 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 JUPP14923 745 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 PNLIPP16233 465 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 TSHRP16473 764 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 CA4P22748 312 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 ZNF75DP51815 510 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 SRP54P61011 504 aaKnown RBP7.01□□□□□ -1.29
VPS50-218ENST00000485994 PTSQ03393 145 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 GBE1Q04446 702 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 IHHQ14623 411 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 PDK1Q15118 436 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 TEX44Q53QW1 395 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 ZNF542PQ5EBM4 170 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 LRRC73Q5JTD7 316 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 FAXCQ5TGI0 409 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 ENPP7Q6UWV6 458 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 USP45Q70EL2 814 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 ZNF765Q7L2R6 523 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 GAS2L3Q86XJ1 694 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 GKN2Q86XP6 184 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 CPNE8Q86YQ8 564 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 CCDC13Q8IYE1 715 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 PHACTR4Q8IZ21 702 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 RCOR2Q8IZ40 523 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 NRSN1Q8IZ57 195 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 CNTD1Q8N815 330 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 OR56A4Q8NGH8 313 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 SCG3Q8WXD2 468 aaKnown RBP7.01□□□□□ -1.29
VPS50-218ENST00000485994 HPS1Q92902 700 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms