RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 PHTF1Q9UMS5 762 aa11.35□□□□□ -0.59
SND1-212ENST00000485871 ZNF711Q9Y462 761 aa11.35□□□□□ -0.59
SND1-212ENST00000485871 KCTD3Q9Y597 815 aa11.35□□□□□ -0.59
SND1-212ENST00000485871 ACTL7BQ9Y614 415 aa11.35□□□□□ -0.59
SND1-212ENST00000485871 RPS6KL1Q9Y6S9 549 aa11.35□□□□□ -0.59
SND1-212ENST00000485871 FAM169AQ9Y6X4 670 aa11.35□□□□□ -0.59
SND1-212ENST00000485871 TRIOO75962 3097 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 A0A0U1RQS6 177 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 NPIPB15A6NHN6 443 aaPredicted RBP11.34□□□□□ -0.59
SND1-212ENST00000485871 FAM159BA6NKW6 160 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 UPK3BL1B0FP48 263 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 UPK3BL2E5RIL1 263 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 KLF8O95600 359 aaPredicted RBP11.34□□□□□ -0.59
SND1-212ENST00000485871 TIMP2P16035 220 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 CTPS1P17812 591 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 LHCGRP22888 699 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 ITGB7P26010 798 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 GCAP28676 217 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 HPDP32754 393 aaPredicted RBP11.34□□□□□ -0.59
SND1-212ENST00000485871 LSP1P33241 339 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 ID4P47928 161 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 ARCN1P48444 511 aaKnown RBP11.34□□□□□ -0.59
SND1-212ENST00000485871 ATP1A2P50993 1020 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 SIGLEC14Q08ET2 396 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 RALGDSQ12967 914 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 EFTUD2Q15029 972 aaKnown RBP eCLIP11.34□□□□□ -0.595e-6■□□□□ 10.3
SND1-212ENST00000485871 TAF1AQ15573 450 aaPredicted RBP11.34□□□□□ -0.59
SND1-212ENST00000485871 UGP2Q16851 508 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 HSF5Q4G112 596 aaPredicted RBP11.34□□□□□ -0.59
SND1-212ENST00000485871 KIAA0930Q6ICG6 404 aaPredicted RBP11.34□□□□□ -0.59
SND1-212ENST00000485871 ESRP1Q6NXG1 681 aaKnown RBP11.34□□□□□ -0.59
SND1-212ENST00000485871 CASC4Q6P4E1 433 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 ZNF449Q6P9G9 518 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 CAPN12Q6ZSI9 719 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 MICALCLQ6ZW33 695 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 TDRPQ86YL5 185 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 UNC5BQ8IZJ1 945 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 TXNDC5Q8NBS9 432 aaKnown RBP11.34□□□□□ -0.59
SND1-212ENST00000485871 PPHLN1Q8NEY8 458 aaKnown RBP11.34□□□□□ -0.59
SND1-212ENST00000485871 OR2T3Q8NH03 318 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 BLOC1S5Q8TDH9 187 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 FBF1Q8TES7 1133 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 FAM131CQ96AQ9 280 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 ZNF669Q96BR6 464 aaPredicted RBP11.34□□□□□ -0.59
SND1-212ENST00000485871 SCRN2Q96FV2 425 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 C19orf43Q9BQ61 176 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 DHRS4Q9BTZ2 278 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 TRABDQ9H4I3 376 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 VPS37BQ9H9H4 285 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 LTB4R2Q9NPC1 389 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.34□□□□□ -0.59
SND1-212ENST00000485871 SENP1Q9P0U3 644 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 SAMD15Q9P1V8 674 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 SLC2A6Q9UGQ3 507 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 CA14Q9ULX7 337 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 ARL5AQ9Y689 179 aa11.34□□□□□ -0.59
SND1-212ENST00000485871 TLDC2A0PJX2 215 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 CCDC78A2IDD5 438 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 C16orf96A6NNT2 1141 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 CXorf49A8MYA2 514 aaPredicted RBP11.33□□□□□ -0.6
SND1-212ENST00000485871 POLBP06746 335 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 HOXB2P14652 356 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 DRD3P35462 400 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 HNF1BP35680 557 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 ABL2P42684 1182 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 ARSDP51689 593 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 EPHB1P54762 984 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 SATB1Q01826 763 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 SEPT6Q14141 434 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 PTPRCAPQ14761 206 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 CNGA3Q16281 694 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 CRTC1Q6UUV9 634 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 ZNF852Q6ZMS4 543 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 NLRP9Q7RTR0 991 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 ASCL5Q7RTU5 278 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 LYSMD3Q7Z3D4 306 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 TRMT11Q7Z4G4 463 aaKnown RBP11.33□□□□□ -0.6
SND1-212ENST00000485871 GLT6D1Q7Z4J2 308 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 UBALD2Q8IYN6 164 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.33□□□□□ -0.6
SND1-212ENST00000485871 OR13C4Q8NGS5 318 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 RPLP0P6Q8NHW5 317 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 BCAS4Q8TDM0 211 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 STYXQ8WUJ0 223 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 CERS2Q96G23 380 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 IL17CQ9P0M4 197 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 GGT7Q9UJ14 662 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 MMP17Q9ULZ9 603 aa11.33□□□□□ -0.6
SND1-212ENST00000485871 NDRG2Q9UN36 371 aaKnown RBP11.33□□□□□ -0.6
SND1-212ENST00000485871 MTF2Q9Y483 593 aaPredicted RBP11.33□□□□□ -0.6
SND1-212ENST00000485871 ATXN2Q99700 1313 aaKnown RBP11.33□□□□□ -0.6
SND1-212ENST00000485871 DOCK9Q9BZ29 2069 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 SPTBN4Q9H254 2564 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 CHURC1-FNTBB4DL54 471 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 PROB1E7EW31 1015 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 C1QTNF3-AMACRE9PGA6 284 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 H7C0S8 307 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 KPNA3O00505 521 aaPredicted RBP11.32□□□□□ -0.6
SND1-212ENST00000485871 EBAG9O00559 213 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 AREL1O15033 823 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms