RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 STRADBQ9C0K7 418 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 OLA1Q9NTK5 396 aaKnown RBP6.74□□□□□ -1.33
SMC4-217ENST00000485867 SFMBT1Q9UHJ3 866 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 LOXL2Q9Y4K0 774 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 LRP4O75096 1905 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 DIDO1Q9BTC0 2240 aaKnown RBP6.73□□□□□ -1.33
SMC4-217ENST00000485867 SPTY2D1-AS1A0A0U1RR47 76 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 A6NNZ2 444 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 TMX2-CTNND1H3BSU7 103 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 IRAK2O43187 625 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 PPM1BO75688 479 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 VNN1O95497 513 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 P4HA1P13674 534 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 GNLYP22749 145 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 CD82P27701 267 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 CASP4P49662 377 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 MLLT10P55197 1068 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 RPS24P62847 133 aaKnown RBP6.73□□□□□ -1.33
SMC4-217ENST00000485867 ECT2LQ008S8 904 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 INCA1Q0VD86 236 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 CDH18Q13634 790 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 DPY19L1Q2PZI1 675 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 FSCBQ5H9T9 825 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 RAB41Q5JT25 222 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 PIP5KL1Q5T9C9 394 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 FAM46CQ5VWP2 391 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 RNF219Q5W0B1 726 aaPredicted RBP6.73□□□□□ -1.33
SMC4-217ENST00000485867 KYAT3Q6YP21 454 aaKnown RBP6.73□□□□□ -1.33
SMC4-217ENST00000485867 Q6ZSR6 202 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 MAMDC2Q7Z304 686 aaPredicted RBP6.73□□□□□ -1.33
SMC4-217ENST00000485867 PARGQ86W56 976 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 HORMAD1Q86X24 394 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 DCP2Q8IU60 420 aaKnown RBP6.73□□□□□ -1.33
SMC4-217ENST00000485867 SRRM1Q8IYB3 904 aaKnown RBP6.73□□□□□ -1.33
SMC4-217ENST00000485867 LZTR1Q8N653 840 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 XXYLT1Q8NBI6 393 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 NETO2Q8NC67 525 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 HJURPQ8NCD3 748 aaPredicted RBP6.73□□□□□ -1.33
SMC4-217ENST00000485867 LMX1AQ8TE12 382 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 FRS2Q8WU20 508 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 NDRG1Q92597 394 aaKnown RBP6.73□□□□□ -1.33
SMC4-217ENST00000485867 USP7Q93009 1102 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 MYEOVQ96EZ4 313 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 RCC1LQ96I51 464 aaKnown RBP6.73□□□□□ -1.33
SMC4-217ENST00000485867 PPP1R13BQ96KQ4 1090 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 BMFQ96LC9 184 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 GFM1Q96RP9 751 aaKnown RBP6.73□□□□□ -1.33
SMC4-217ENST00000485867 IL12RB2Q99665 862 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 SPATA25Q9BR10 227 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 AGPAT3Q9NRZ7 376 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 PANK4Q9NVE7 773 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 PADI4Q9UM07 663 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 LIMCH1Q9UPQ0 1083 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 ZFR2Q9UPR6 939 aaKnown RBP6.73□□□□□ -1.33
SMC4-217ENST00000485867 CEP83Q9Y592 693 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 SPG11Q96JI7 2443 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 CCDC168Q8NDH2 2452 aa6.73□□□□□ -1.33
SMC4-217ENST00000485867 HIVEP1P15822 2718 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 TNRC6AQ8NDV7 1962 aaKnown RBP6.72□□□□□ -1.33
SMC4-217ENST00000485867 A0A1W2PQM1 296 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 POM121BA6NF01 834 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 C1QTNF3-AMACRE9PGA6 284 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 CLIC2O15247 247 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 TGFB1I1O43294 461 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 ACSL4O60488 711 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 MOCS3O95396 460 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 IGLV3-27P01718 113 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 C4BPAP04003 597 aaKnown RBP6.72□□□□□ -1.33
SMC4-217ENST00000485867 TRIM21P19474 475 aaKnown RBP6.72□□□□□ -1.33
SMC4-217ENST00000485867 SEPHS1P49903 392 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 CCL7P80098 99 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 KLRB1Q12918 225 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 LACTB2Q53H82 288 aaPredicted RBP6.72□□□□□ -1.33
SMC4-217ENST00000485867 TPRG1LQ5T0D9 272 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 PM20D1Q6GTS8 502 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 NADSYN1Q6IA69 706 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 SPOPLQ6IQ16 392 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 NEK5Q6P3R8 708 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 PIGZQ86VD9 579 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 APCDD1Q8J025 514 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 RBFAQ8N0V3 343 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 SDR16C5Q8N3Y7 309 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 CARNMT1Q8N4J0 409 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 RNF139Q8WU17 664 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 JPH3Q8WXH2 748 aaPredicted RBP6.72□□□□□ -1.33
SMC4-217ENST00000485867 OR8D1Q8WZ84 308 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 PEX11GQ96HA9 241 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 EPSTI1Q96J88 318 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 CATSPER2Q96P56 530 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 BDH2Q9BUT1 245 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 ULBP1Q9BZM6 244 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 ADGRG4Q8IZF6 3080 aa6.72□□□□□ -1.33
SMC4-217ENST00000485867 CHD5Q8TDI0 1954 aa6.71□□□□□ -1.33
SMC4-217ENST00000485867 A0A087X0B3 334 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 TYW5A2RUC4 315 aaKnown RBP6.71□□□□□ -1.34
SMC4-217ENST00000485867 LRRIQ3A6PVS8 624 aaPredicted RBP6.71□□□□□ -1.34
SMC4-217ENST00000485867 LMO7DNF2Z398 122 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 AGRPO00253 132 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 ALOX15BO15296 676 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 RAD51BO15315 384 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms