RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 ZNF235Q14590 738 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 DENND2CQ68D51 928 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 TMPRSS9Q7Z410 1059 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 SPRED1Q7Z699 444 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 NUS1Q96E22 293 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 NOD2Q9HC29 1040 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 SPATS2LQ9NUQ6 558 aaKnown RBP19.26■□□□□ 0.67
COL27A1-205ENST00000485397 SCINQ9Y6U3 715 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 PDE2AO00408 941 aaPredicted RBP19.25■□□□□ 0.67
COL27A1-205ENST00000485397 HEXIM1O94992 359 aaKnown RBP19.25■□□□□ 0.67
COL27A1-205ENST00000485397 FUCA1P04066 466 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 VIPR1P32241 457 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 PCK1P35558 622 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 ETV5P41161 510 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 MAZP56270 477 aaKnown RBP19.25■□□□□ 0.67
COL27A1-205ENST00000485397 MAXP61244 160 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 KLHL30Q0D2K2 578 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 TRAF2Q12933 501 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 ARHGEF7Q14155 803 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 PTPRRQ15256 657 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 DPYSL2Q16555 572 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 HSD11B1LQ7Z5J1 315 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 POLNQ7Z5Q5 900 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 HEATR4Q86WZ0 1026 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 NRROSQ86YC3 692 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 PTCD2Q8WV60 388 aaKnown RBP19.25■□□□□ 0.67
COL27A1-205ENST00000485397 SPOCK2Q92563 424 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 HSPH1Q92598 858 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 NAP1L5Q96NT1 182 aaPredicted RBP19.25■□□□□ 0.67
COL27A1-205ENST00000485397 NUDCD1Q96RS6 583 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 CARS2Q9HA77 564 aaKnown RBP19.25■□□□□ 0.67
COL27A1-205ENST00000485397 TMEM63CQ9P1W3 806 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 KALRNO60229 2985 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 COL6A6A6NMZ7 2263 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 AHCTF1Q8WYP5 2266 aa19.25■□□□□ 0.67
COL27A1-205ENST00000485397 GOLGA6L22H0YM25 854 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 B4GAT1O43505 415 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 NUDT21O43809 227 aaKnown RBP19.24■□□□□ 0.67
COL27A1-205ENST00000485397 MAFKO60675 156 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 SOCS5O75159 536 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 CPP00450 1065 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 CEACAM5P06731 702 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 MYCLP1P12525 358 aaPredicted RBP19.24■□□□□ 0.67
COL27A1-205ENST00000485397 CCNB1P14635 433 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 LHCGRP22888 699 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 HSPA9P38646 679 aaKnown RBP19.24■□□□□ 0.67
COL27A1-205ENST00000485397 ARL4AP40617 200 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 ETV3P41162 512 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 B4GALNT1Q00973 533 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 FILIP1LQ4L180 1135 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 BOLA3Q53S33 107 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 TXNRD3NBQ6F5E7 133 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 TMCO3Q6UWJ1 677 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 CBARPQ8N350 705 aaPredicted RBP19.24■□□□□ 0.67
COL27A1-205ENST00000485397 GPBAR1Q8TDU6 330 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 CSPG4P5Q96PW8 444 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 MGME1Q9BQP7 344 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 TEX101Q9BY14 249 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 NAT10Q9H0A0 1025 aaKnown RBP19.24■□□□□ 0.67
COL27A1-205ENST00000485397 MRPL47Q9HD33 250 aaKnown RBP19.24■□□□□ 0.67
COL27A1-205ENST00000485397 PHPT1Q9NRX4 125 aaPredicted RBP19.24■□□□□ 0.67
COL27A1-205ENST00000485397 ACSL6Q9UKU0 697 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 PHTF1Q9UMS5 762 aa19.24■□□□□ 0.67
COL27A1-205ENST00000485397 A0A1W2PQ67 120 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 A0A1W2PQC6 194 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 J3QKU1 62 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 NVLO15381 856 aaKnown RBP19.23■□□□□ 0.67
COL27A1-205ENST00000485397 MBD3O95983 291 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 FGF1P05230 155 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 MYBL1P10243 752 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 RARAP10276 462 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 AK4P27144 223 aaPredicted RBP19.23■□□□□ 0.67
COL27A1-205ENST00000485397 TSR1Q2NL82 804 aaKnown RBP19.23■□□□□ 0.67
COL27A1-205ENST00000485397 TSPAN33Q86UF1 283 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 C17orf82Q86X59 251 aaPredicted RBP19.23■□□□□ 0.67
COL27A1-205ENST00000485397 SLITRK4Q8IW52 837 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 KIAA1524Q8TCG1 905 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 ZDHHC1Q8WTX9 485 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 TRIM11Q96F44 468 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 DTD2Q96FN9 168 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 MED8Q96G25 268 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 BPIFA3Q9BQP9 254 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 FRMD8Q9BZ67 464 aaPredicted RBP19.23■□□□□ 0.67
COL27A1-205ENST00000485397 ISCUQ9H1K1 167 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 SEMA6CQ9H3T2 930 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 RDH14Q9HBH5 336 aa19.23■□□□□ 0.67
COL27A1-205ENST00000485397 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.23■□□□□ 0.67
COL27A1-205ENST00000485397 ARHGEF17Q96PE2 2063 aaPredicted RBP19.23■□□□□ 0.67
COL27A1-205ENST00000485397 CFAP46Q8IYW2 2715 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 PRAMEF33A0A0G2JMD5 474 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 A0A0U1RQS6 177 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 GOLGA6CA6NDK9 693 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 GOLGA6BA6NDN3 693 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 NPIPB15A6NHN6 443 aaPredicted RBP19.22■□□□□ 0.67
COL27A1-205ENST00000485397 SMTNL1A8MU46 457 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 B8ZZF3 427 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 PRAMEF10O60809 474 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 GOLGA6DP0CG33 693 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 CYP2A6P11509 494 aaPredicted RBP19.22■□□□□ 0.67
COL27A1-205ENST00000485397 GNPDA1P46926 289 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms