RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 NKX2-4Q9H2Z4 354 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 VWA7Q9Y334 891 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 HTRA2O43464 458 aaPredicted RBP16.72■□□□□ 0.27
CTSA-207ENST00000484855 DCTN3O75935 186 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 UBOX5O94941 541 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 PRSS56P0CW18 603 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 SLC1A6P48664 564 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 KPNA2P52292 529 aaKnown RBP16.72■□□□□ 0.27
CTSA-207ENST00000484855 RPL26P61254 145 aaKnown RBP16.72■□□□□ 0.27
CTSA-207ENST00000484855 DLG1Q12959 904 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 SETDB1Q15047 1291 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 ADGRG2Q8IZP9 1017 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 FSTL5Q8N475 847 aaPredicted RBP16.72■□□□□ 0.27
CTSA-207ENST00000484855 NXNL1Q96CM4 212 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 LMAN2LQ9H0V9 348 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 SFXN1Q9H9B4 322 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 ACTR5Q9H9F9 607 aaPredicted RBP16.72■□□□□ 0.27
CTSA-207ENST00000484855 MAGEE1Q9HCI5 957 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 GPAMQ9HCL2 828 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 BPIFA1Q9NP55 256 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 INTS10Q9NVR2 710 aaKnown RBP16.72■□□□□ 0.27
CTSA-207ENST00000484855 MARK1Q9P0L2 795 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 FKBPLQ9UIM3 349 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 RPL26L1Q9UNX3 145 aaKnown RBP16.72■□□□□ 0.27
CTSA-207ENST00000484855 DLDP09622 509 aaKnown RBP16.71■□□□□ 0.27
CTSA-207ENST00000484855 ALPIP09923 528 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 SERPINA4P29622 427 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 ARFIP2P53365 341 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 SULT2A1Q06520 285 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 CCDC15Q0P6D6 951 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 DMC1Q14565 340 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 PPP2R2DQ66LE6 453 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 ZYG11AQ6WRX3 759 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 SPATA6LQ8N4H0 392 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 SCG3Q8WXD2 468 aaKnown RBP16.71■□□□□ 0.27
CTSA-207ENST00000484855 ISG20Q96AZ6 181 aaKnown RBP16.71■□□□□ 0.27
CTSA-207ENST00000484855 TMEM120AQ9BXJ8 343 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 GPR63Q9BZJ6 419 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 XPR1Q9UBH6 696 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 A0A0U1RQS6 177 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 ITM2AO43736 263 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 BNIP3LO60238 219 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 LYPLA1O75608 230 aaPredicted RBP16.71■□□□□ 0.27
CTSA-207ENST00000484855 HOXB8P17481 243 aaPredicted RBP16.71■□□□□ 0.27
CTSA-207ENST00000484855 MC4RP32245 332 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 CDKN2DP55273 166 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 ECT2LQ008S8 904 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 CSHL1Q14406 222 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 ACCSLQ4AC99 568 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 LYSMD3Q7Z3D4 306 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 NAT16Q8N8M0 369 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 GPR78Q96P69 363 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 LRRC37BQ96QE4 947 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 UNKQ9C0B0 810 aaKnown RBP16.71■□□□□ 0.27
CTSA-207ENST00000484855 CEP44Q9C0F1 390 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 KCNK13Q9HB14 408 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 MARCOQ9UEW3 520 aaPredicted RBP16.71■□□□□ 0.27
CTSA-207ENST00000484855 PKP3Q9Y446 797 aa16.71■□□□□ 0.27
CTSA-207ENST00000484855 A0A0J9YYE9 177 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 MYO1CO00159 1063 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 TRBC1P01850 177 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 KITP10721 976 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 SCTRP47872 440 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 FAM83EQ2M2I3 478 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 ZNF549Q6P9A3 640 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 AHI1Q8N157 1196 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 TMEM151AQ8N4L1 468 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 PCDH20Q8N6Y1 951 aaKnown RBP16.7■□□□□ 0.26
CTSA-207ENST00000484855 VN1R2Q8NFZ6 395 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 PPP4R1Q8TF05 950 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 HEXDCQ8WVB3 486 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 IGSF5Q9NSI5 407 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 OXSMQ9NWU1 459 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 DUS2Q9NX74 493 aaKnown RBP16.7■□□□□ 0.26
CTSA-207ENST00000484855 HECAQ9UBI9 543 aaPredicted RBP16.7■□□□□ 0.26
CTSA-207ENST00000484855 FNDC3AQ9Y2H6 1198 aaKnown RBP16.7■□□□□ 0.26
CTSA-207ENST00000484855 UBA6A0AVT1 1052 aaPredicted RBP16.7■□□□□ 0.26
CTSA-207ENST00000484855 TRIM13O60858 407 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 H2AFYO75367 372 aaKnown RBP16.7■□□□□ 0.26
CTSA-207ENST00000484855 SBK3P0C264 359 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 FDXRP22570 491 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 LIG3P49916 1009 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 ABCE1P61221 599 aaKnown RBP16.7■□□□□ 0.26
CTSA-207ENST00000484855 GALNTL6Q49A17 601 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 AGAP9Q5VTM2 703 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 ADIPOR2Q86V24 386 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 ERP27Q96DN0 273 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 LRRC3BQ96PB8 259 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 TUBGCP5Q96RT8 1024 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 SLC2A11Q9BYW1 496 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 MYLK2Q9H1R3 596 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 MRPL46Q9H2W6 279 aaKnown RBP16.7■□□□□ 0.26
CTSA-207ENST00000484855 IL17CQ9P0M4 197 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 MSRAQ9UJ68 235 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 SLC12A4Q9UP95 1085 aa16.7■□□□□ 0.26
CTSA-207ENST00000484855 RANBP2P49792 3224 aaKnown RBP16.69■□□□□ 0.26
CTSA-207ENST00000484855 PRRC2BQ5JSZ5 2229 aaKnown RBP16.69■□□□□ 0.26
CTSA-207ENST00000484855 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.69■□□□□ 0.26
CTSA-207ENST00000484855 H7C0S8 307 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 NDUFS3O75489 264 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms