RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 SH3BP5O60239 455 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 PMPCBO75439 489 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 CEACAM1P13688 526 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 THOP1P52888 689 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 IL9RQ01113 521 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 PTSQ03393 145 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 PDE1CQ14123 709 aaPredicted RBP26.67■■□□□ 1.86
SMDT1-203ENST00000484235 FZD2Q14332 565 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 ANKRD20A2Q5SQ80 823 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 ANKRD20A1Q5TYW2 823 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 ANKRD20A3Q5VUR7 823 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 LRRC66Q68CR7 880 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 DENND2CQ68D51 928 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 ITPRIPL1Q6GPH6 555 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 CCDC70Q6NSX1 233 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 NAXDQ8IW45 347 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 SLC35B2Q8TB61 432 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 SAP25Q8TEE9 199 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 SETD7Q8WTS6 366 aaKnown RBP26.67■■□□□ 1.86
SMDT1-203ENST00000484235 FRMD8P1Q9BZ68 369 aaPredicted RBP26.67■■□□□ 1.86
SMDT1-203ENST00000484235 UBP1Q9NZI7 540 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 RSPH14Q9UHP6 348 aa26.67■■□□□ 1.86
SMDT1-203ENST00000484235 ASCC3Q8N3C0 2202 aaKnown RBP26.67■■□□□ 1.86
SMDT1-203ENST00000484235 GOLGA8CPA6NN73 597 aa26.66■■□□□ 1.86
SMDT1-203ENST00000484235 FLRT2O43155 660 aa26.66■■□□□ 1.86
SMDT1-203ENST00000484235 EPOP01588 193 aa26.66■■□□□ 1.86
SMDT1-203ENST00000484235 MTM1Q13496 603 aa26.66■■□□□ 1.86
SMDT1-203ENST00000484235 KDM7AQ6ZMT4 941 aa26.66■■□□□ 1.86
SMDT1-203ENST00000484235 RAVER1Q8IY67 606 aaKnown RBP26.66■■□□□ 1.86
SMDT1-203ENST00000484235 DEFB124Q8NES8 71 aa26.66■■□□□ 1.86
SMDT1-203ENST00000484235 DTD2Q96FN9 168 aa26.66■■□□□ 1.86
SMDT1-203ENST00000484235 GBA3Q9H227 469 aa26.66■■□□□ 1.86
SMDT1-203ENST00000484235 JRKLQ9Y4A0 524 aa26.66■■□□□ 1.86
SMDT1-203ENST00000484235 NDST3O95803 873 aa26.65■■□□□ 1.86
SMDT1-203ENST00000484235 PCCBP05166 539 aa26.65■■□□□ 1.86
SMDT1-203ENST00000484235 ITGAVP06756 1048 aa26.65■■□□□ 1.86
SMDT1-203ENST00000484235 EPHA8P29322 1005 aaPredicted RBP26.65■■□□□ 1.86
SMDT1-203ENST00000484235 ETV3P41162 512 aa26.65■■□□□ 1.86
SMDT1-203ENST00000484235 NOVA1P51513 510 aaKnown RBP26.65■■□□□ 1.86
SMDT1-203ENST00000484235 WNT3AP56704 352 aa26.65■■□□□ 1.86
SMDT1-203ENST00000484235 MPP3Q13368 585 aa26.65■■□□□ 1.86
SMDT1-203ENST00000484235 GALNT3Q14435 633 aa26.65■■□□□ 1.86
SMDT1-203ENST00000484235 KDELC1Q6UW63 502 aa26.65■■□□□ 1.86
SMDT1-203ENST00000484235 Q6ZVL8 140 aa26.65■■□□□ 1.86
SMDT1-203ENST00000484235 TECPR1Q7Z6L1 1165 aa26.65■■□□□ 1.86
SMDT1-203ENST00000484235 PARGQ86W56 976 aa26.65■■□□□ 1.86
SMDT1-203ENST00000484235 PLA2G15Q8NCC3 412 aa26.65■■□□□ 1.86
SMDT1-203ENST00000484235 NUS1Q96E22 293 aa26.65■■□□□ 1.86
SMDT1-203ENST00000484235 OXNAD1Q96HP4 312 aaPredicted RBP26.65■■□□□ 1.86
SMDT1-203ENST00000484235 SPATA13Q96N96 652 aa26.65■■□□□ 1.86
SMDT1-203ENST00000484235 APOOQ9BUR5 198 aa26.65■■□□□ 1.86
SMDT1-203ENST00000484235 TRMT1Q9NXH9 659 aaKnown RBP26.65■■□□□ 1.86
SMDT1-203ENST00000484235 A0A0U1RQS6 177 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 LOC285095A0A1B0GVY8 99 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 C5orf60A6NFR6 353 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 ANXA9O76027 345 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 TRIM23P36406 574 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 GRK6P43250 576 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 TNNT3P45378 269 aaPredicted RBP26.64■■□□□ 1.86
SMDT1-203ENST00000484235 STC1P52823 247 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 BNIP3Q12983 259 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 CDKN3Q16667 212 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 TPRG1LQ5T0D9 272 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 ESRP1Q6NXG1 681 aaKnown RBP26.64■■□□□ 1.86
SMDT1-203ENST00000484235 PNCKQ6P2M8 343 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 FAM71DQ8N9W8 422 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 RHBDD1Q8TEB9 315 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 CAMK1GQ96NX5 476 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 SRPK1Q96SB4 655 aaKnown RBP26.64■■□□□ 1.86
SMDT1-203ENST00000484235 MAGEE1Q9HCI5 957 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 DNAJC28Q9NX36 388 aa26.64■■□□□ 1.86
SMDT1-203ENST00000484235 FRYQ5TBA9 3013 aa26.64■■□□□ 1.85
SMDT1-203ENST00000484235 C1orf232A0A0U1RR37 186 aa26.63■■□□□ 1.85
SMDT1-203ENST00000484235 CLDN7O95471 211 aa26.63■■□□□ 1.85
SMDT1-203ENST00000484235 CSF2P04141 144 aa26.63■■□□□ 1.85
SMDT1-203ENST00000484235 HOXC4P09017 264 aaPredicted RBP26.63■■□□□ 1.85
SMDT1-203ENST00000484235 DPTQ07507 201 aa26.63■■□□□ 1.85
SMDT1-203ENST00000484235 INAVAQ3KP66 663 aa26.63■■□□□ 1.85
SMDT1-203ENST00000484235 PSAPL1Q6NUJ1 521 aa26.63■■□□□ 1.85
SMDT1-203ENST00000484235 MACC1Q6ZN28 852 aa26.63■■□□□ 1.85
SMDT1-203ENST00000484235 NLRP8Q86W28 1048 aa26.63■■□□□ 1.85
SMDT1-203ENST00000484235 GATAD2AQ86YP4 633 aa26.63■■□□□ 1.85
SMDT1-203ENST00000484235 CCDC110Q8TBZ0 833 aa26.63■■□□□ 1.85
SMDT1-203ENST00000484235 CCHCR1Q8TD31 782 aa26.63■■□□□ 1.85
SMDT1-203ENST00000484235 MRGPRX2Q96LB1 330 aa26.63■■□□□ 1.85
SMDT1-203ENST00000484235 PPP1R2P1Q96PQ5 205 aa26.63■■□□□ 1.85
SMDT1-203ENST00000484235 PCOLCE2Q9UKZ9 415 aa26.63■■□□□ 1.85
SMDT1-203ENST00000484235 AAR2Q9Y312 384 aaKnown RBP26.63■■□□□ 1.85
SMDT1-203ENST00000484235 OR1A2Q9Y585 309 aa26.63■■□□□ 1.85
SMDT1-203ENST00000484235 CABIN1Q9Y6J0 2220 aa26.62■■□□□ 1.85
SMDT1-203ENST00000484235 F5H423 210 aaPredicted RBP26.62■■□□□ 1.85
SMDT1-203ENST00000484235 CBFA2T3O75081 653 aa26.62■■□□□ 1.85
SMDT1-203ENST00000484235 GCATO75600 419 aa26.62■■□□□ 1.85
SMDT1-203ENST00000484235 NME1P15531 152 aaKnown RBP26.62■■□□□ 1.85
SMDT1-203ENST00000484235 HTR1BP28222 390 aa26.62■■□□□ 1.85
SMDT1-203ENST00000484235 STIP1P31948 543 aaKnown RBP26.62■■□□□ 1.85
SMDT1-203ENST00000484235 HNRNPKP61978 463 aaKnown RBP eCLIP26.62■■□□□ 1.85
SMDT1-203ENST00000484235 CCDC173Q0VFZ6 552 aa26.62■■□□□ 1.85
SMDT1-203ENST00000484235 PRPSAP1Q14558 356 aa26.62■■□□□ 1.85
SMDT1-203ENST00000484235 ZNF542PQ5EBM4 170 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms