RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 TCN2P20062 427 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 F8A1P23610 371 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 COL8A1P27658 744 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 FBN2P35556 2912 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 GNPDA1P46926 289 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 RGRP47804 291 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 RAB15P59190 212 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 ILF3Q12906 894 aaKnown RBP eCLIP10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 BIRC2Q13490 618 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 SQSTM1Q13501 440 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 SEPT6Q14141 434 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 EXOC3L4Q17RC7 722 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 TSR1Q2NL82 804 aaKnown RBP10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 CCDC14Q49A88 953 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 SNAP47Q5SQN1 464 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 FHL5Q5TD97 284 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 TAF3Q5VWG9 929 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 PNCKQ6P2M8 343 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 TMEM71Q6P5X7 295 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 BRAT1Q6PJG6 821 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 DNAAF5Q86Y56 855 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 FAM71AQ8IYT1 594 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 PYROXD2Q8N2H3 581 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 GPT2Q8TD30 523 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 SSC4DQ8WTU2 575 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 ZNF641Q96N77 438 aaPredicted RBP10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 GSDMCQ9BYG8 508 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 PDCL3Q9H2J4 239 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 RETREG1Q9H6L5 497 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 PLEKHM1Q9Y4G2 1056 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 DOPEY1Q5JWR5 2465 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 CFAP69A5D8W1 941 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 RASA4BC9J798 803 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 BIN1O00499 593 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 ZW10O43264 779 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 RASA4O43374 803 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 VPS4BO75351 444 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 STK17BO94768 372 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 FURINP09958 794 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 ELFN1P0C7U0 828 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 MYCLP1P12525 358 aaPredicted RBP10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 CYP11B1P15538 503 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 PPP1R2P41236 205 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 POLD2P49005 469 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 CTBSQ01459 385 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 MC2RQ01718 297 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 ABHD18Q0P651 414 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 ACOX1Q15067 660 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 CFAP58Q5T655 872 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 AFMIDQ63HM1 303 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 TCTN3Q6NUS6 607 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 ASB18Q6ZVZ8 466 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 ARCQ7LC44 396 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 KDELC2Q7Z4H8 507 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 CREBRFQ8IUR6 639 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 RTL3Q8N8U3 475 aaKnown RBP10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 JOSD2Q8TAC2 188 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 RXFP2Q8WXD0 754 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 CPA5Q8WXQ8 436 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 NSMCE3Q96MG7 304 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 TEFMQ96QE5 360 aaKnown RBP10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 FRMD8Q9BZ67 464 aaPredicted RBP10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 PDFQ9HBH1 243 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 PRDM8Q9NQV8 689 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 TRNAU1APQ9NX07 287 aaKnown RBP10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 PDP2Q9P2J9 529 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 SUFUQ9UMX1 484 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 VPS4AQ9UN37 437 aa10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 TMEM184BQ9Y519 407 aaPredicted RBP10.87□□□□□ -0.67
SMARCC1-205ENST00000483847 TNRC6AQ8NDV7 1962 aaKnown RBP10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 CSMD1Q96PZ7 3565 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 TRBV23OR9-2A0A075B6M9 112 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 MKRN2OSH3BPM6 223 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 J3KR12 359 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 DLGAP3O95886 979 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 EPHB2P29323 1055 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 ADCY8P40145 1251 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 STAT5AP42229 794 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 HDAC4P56524 1084 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 MC1RQ01726 317 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 PAK1Q13153 545 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 GRM3Q14832 879 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 CRTC2Q53ET0 693 aaPredicted RBP10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 DPY19L2P1Q6NXN4 242 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 DPPA4Q7L190 304 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 ARHGAP22Q7Z5H3 698 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 NOP9Q86U38 636 aaKnown RBP10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 TMEM135Q86UB9 458 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 HEATR4Q86WZ0 1026 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 CCDC13Q8IYE1 715 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 GALNT11Q8NCW6 608 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 ECHDC3Q96DC8 303 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 TIGD1Q96MW7 591 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 EFHD1Q9BUP0 239 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 TEX101Q9BY14 249 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 ZMYND15Q9H091 742 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 UBA2Q9UBT2 640 aaPredicted RBP10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 TLK1Q9UKI8 766 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 KCTD3Q9Y597 815 aa10.86□□□□□ -0.67
SMARCC1-205ENST00000483847 ZNF106Q9H2Y7 1883 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms