RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 POU6F1Q14863 301 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 HNRNPA1L2Q32P51 320 aaKnown RBP17.22■□□□□ 0.35
MRPL28-210ENST00000483764 PCID2Q5JVF3 399 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 SPANXN3Q5MJ09 141 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 ARMC12Q5T9G4 340 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 SERPINA13PQ6UXR4 307 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 FAM47EQ6ZV65 393 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 FITM2Q8N6M3 262 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 ZNF366Q8N895 744 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 CHST14Q8NCH0 376 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 C10orf82Q8WW14 230 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 VOPP1Q96AW1 172 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 RMDN1Q96DB5 314 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 HEPHQ9BQS7 1158 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 TSSK1BQ9BXA7 367 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 TMEM245Q9H330 911 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 ZDHHC6Q9H6R6 413 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 SLC2A4RGQ9NR83 387 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 HCN2Q9UL51 889 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 PCDHB9Q9Y5E1 797 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 ANKRD66B4E2M5 251 aa17.21■□□□□ 0.35
MRPL28-210ENST00000483764 TRAFD1O14545 582 aaPredicted RBP17.21■□□□□ 0.35
MRPL28-210ENST00000483764 PGLSO95336 258 aa17.21■□□□□ 0.35
MRPL28-210ENST00000483764 CRHR1P34998 444 aa17.21■□□□□ 0.35
MRPL28-210ENST00000483764 MSLNQ13421 630 aaPredicted RBP17.21■□□□□ 0.35
MRPL28-210ENST00000483764 E2F5Q15329 346 aa17.21■□□□□ 0.35
MRPL28-210ENST00000483764 EGFLAMQ63HQ2 1017 aa17.21■□□□□ 0.35
MRPL28-210ENST00000483764 ASRGL1Q7L266 308 aa17.21■□□□□ 0.35
MRPL28-210ENST00000483764 OTOAQ7RTW8 1153 aa17.21■□□□□ 0.35
MRPL28-210ENST00000483764 ADHFE1Q8IWW8 467 aa17.21■□□□□ 0.35
MRPL28-210ENST00000483764 LPCAT1Q8NF37 534 aa17.21■□□□□ 0.35
MRPL28-210ENST00000483764 MRRFQ96E11 262 aaKnown RBP17.21■□□□□ 0.35
MRPL28-210ENST00000483764 ZNF641Q96N77 438 aaPredicted RBP17.21■□□□□ 0.35
MRPL28-210ENST00000483764 TRIM56Q9BRZ2 755 aaKnown RBP17.21■□□□□ 0.35
MRPL28-210ENST00000483764 SUV39H2Q9H5I1 410 aa17.21■□□□□ 0.35
MRPL28-210ENST00000483764 FAM96AQ9H5X1 160 aa17.21■□□□□ 0.35
MRPL28-210ENST00000483764 CHRAC1Q9NRG0 131 aa17.21■□□□□ 0.35
MRPL28-210ENST00000483764 PLLPQ9Y342 182 aa17.21■□□□□ 0.35
MRPL28-210ENST00000483764 KIAA1549LQ6ZVL6 1849 aa17.21■□□□□ 0.35
MRPL28-210ENST00000483764 EDDM13A0A1B0GTR0 161 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 FAM237BA0A1B0GVD1 139 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 ANTXRLA6NF34 631 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 K7EQS6 105 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 WFS1O76024 890 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 POLBP06746 335 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 PYGBP11216 843 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 HLA-EP13747 358 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 HNRNPLP14866 589 aaKnown RBP eCLIP17.21■□□□□ 0.34
MRPL28-210ENST00000483764 SERPINB4P48594 390 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 RPL26P61254 145 aaKnown RBP17.21■□□□□ 0.34
MRPL28-210ENST00000483764 PON2Q15165 354 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 INSCQ1MX18 579 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 SPRED3Q2MJR0 410 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 FAM91A1Q658Y4 838 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 ICE2Q659A1 982 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 PKN3Q6P5Z2 889 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 TMEM135Q86UB9 458 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 PAF1Q8N7H5 531 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 PPHLN1Q8NEY8 458 aaKnown RBP17.21■□□□□ 0.34
MRPL28-210ENST00000483764 CFAP61Q8NHU2 1237 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 PTCD2Q8WV60 388 aaKnown RBP17.21■□□□□ 0.34
MRPL28-210ENST00000483764 EZH1Q92800 747 aaPredicted RBP17.21■□□□□ 0.34
MRPL28-210ENST00000483764 C7orf26Q96N11 449 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 SRPK1Q96SB4 655 aaKnown RBP17.21■□□□□ 0.34
MRPL28-210ENST00000483764 KIFC1Q9BW19 673 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 LRMDAQ9H2I8 198 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 PLAC1Q9HBJ0 212 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 GRID1Q9ULK0 1009 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 SOX13Q9UN79 622 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 TICRRQ7Z2Z1 1910 aa17.21■□□□□ 0.34
MRPL28-210ENST00000483764 NPC1O15118 1278 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 DNAJC6O75061 913 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 NEFHP12036 1026 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 IL12RB1P42701 662 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 EPHB1P54762 984 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 GRSF1Q12849 480 aaKnown RBP eCLIP17.2■□□□□ 0.34
MRPL28-210ENST00000483764 SLC44A4Q53GD3 710 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 TMEM196Q5HYL7 178 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 C9orf64Q5T6V5 341 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 IER5LQ5T953 404 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 GDPD4Q6W3E5 623 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 GRIN3AQ8TCU5 1115 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 PIH1D2Q8WWB5 315 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 MSANTD3Q96H12 275 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 LRIG1Q96JA1 1093 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 SERAC1Q96JX3 654 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 RMDN2Q96LZ7 410 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 RANBP9Q96S59 729 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 ACOX2Q99424 681 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 ZDHHC4Q9NPG8 344 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 SUN2Q9UH99 717 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 IL36AQ9UHA7 158 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 TCAF1Q9Y4C2 921 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 RPS6KL1Q9Y6S9 549 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 WASF2Q9Y6W5 498 aa17.2■□□□□ 0.34
MRPL28-210ENST00000483764 HEATR9A2RTY3 570 aa17.19■□□□□ 0.34
MRPL28-210ENST00000483764 SIN3BO75182 1162 aa17.19■□□□□ 0.34
MRPL28-210ENST00000483764 UGT2B4P06133 528 aa17.19■□□□□ 0.34
MRPL28-210ENST00000483764 DRD1P21728 446 aa17.19■□□□□ 0.34
MRPL28-210ENST00000483764 HADHAP40939 763 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms